Alexandromys fortis (reed vole): 126515248
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Entry
126515248 CDS
T08493
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot02010
ABC transporters
mfot04148
Efferocytosis
mfot04975
Fat digestion and absorption
mfot04979
Cholesterol metabolism
mfot05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126515248
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126515248
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
126515248
04979 Cholesterol metabolism
126515248
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
126515248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfot02000
]
126515248
Transporters [BR:
mfot02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126515248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Tsi1
Motif
Other DBs
NCBI-GeneID:
126515248
NCBI-ProteinID:
XP_050020728
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SLKDMHKVLRTLRQIKHSSSNLKLQDFLVDNETFSGFLHQNLSLPSPTVDSLLRADVSLQ
KVFLQGYQLHLASLCNGSSLEKIIRLGGPEVSALCGLPREKLDAAERVLRYNMDILKPVM
TRLNSTSLLPTQQLAEATRTLLNSLGGLAQELFSTKSWSDMRQEVMFLTNVNVSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDADTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PQIWTFMESSQEMDLVRTLLDNRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNGS
AYTWREAFNETNQAIQTISRFMECVNLNKLEPVPTEVRLINKSMELLDERKFWAGIVFTG
IAPGSAELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGAEKTTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVIILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTALSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEEIEEKSHLGSGQKGASEICMEEEPTHLRLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSCLKKVVPELPAAGQSGGGGGEVQRLVALTQDVSAISNLIRKHVSEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQ
LKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPGDSGTQKLLNALTRDPGFGTRCMEGDPIPDTPCLVGEEDWST
APVPQTIMDLFQYGNWTMKNPSPTCQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQALPPSREVNDAIKQV
KKLLKLTKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QEGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDALLNKNSIL
SNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagttaaggttgctgctgtggaagaacctgacgttccgaagacga
caaacatgtcagctgttactggaagtggcctggcctctcttcatcttcctgatcctgatc
tccgtccgcctgagctacccgccctatgaacagcatgagtgccacttcccgaataaagcc
atgccttctgcaggaacccttccgtgggtacaggggattatctgtaatgccaacaaccct
tgcttccgttatccgactcccggggaagctcctggtgttgttggaaactttaacaagtcc
attgtgtcccgcctgttctcagatgctcgaagacttcttttatacagccaaaaagacacc
agccttaaggacatgcacaaggtcctgagaacattacggcagatcaagcattccagctca
aatttgaagctccaggatttcctggtggacaatgagaccttctctggattccttcatcag
aacctgtccctcccaagcccgactgtggacagcctgctgcgggctgatgtcagtctccag
aaggtatttttgcaaggctaccagttacatttggccagtctgtgtaatggatcaagtcta
gaaaaaatcattcggctgggtggcccggaagtgtctgccctttgtggtttaccaagggag
aagctagatgccgcggagcgagtgctgcgctacaacatggacatcctgaagccggtcatg
acaagactgaactctacatctcttctcccgacccagcagctggcggaagccaccagaaca
ttgctgaacagcttaggggggctggcccaagagctgttcagcacaaagagctggagtgac
atgaggcaggaggtgatgtttctgaccaacgtgaacgtctccagctcctccacccagatc
taccaggccgtgtcccgcattgtctgtggtcaccccgagggtggggggctgaagatcaag
tcgctcaactggtacgaggataacaactacaaagccctcttcggaggcaacggcaccgaa
gaggacgcggacaccttctatgacaattctacaactccttattgcaatgatttgatgaag
aacttggagtccagccctctttctcgaattatttggaaggcactcaagcctttgcttgtt
ggaaagattctgtatactcccgacactccagctacaagacaggtcatggctgaggtgaac
aagaccttccaggagctggctgtcttccatgatctggagggcatgtgggaagaactcagc
ccccagatctggaccttcatggagagcagccaagagatggaccttgtgcggacgctgtta
gacaacagaggcaatgaccagttttgggaacagaagttggatggattagattggaccgcc
caagacatcatggcatttctggccaagaacccagaggatgttcagtccccaaatggctcc
gcgtatacatggagagaagctttcaatgaaaccaaccaggcaatccagacgatatcgcgc
ttcatggagtgtgtcaacctgaacaagctggagcctgttccaacagaagtccggctcatc
aacaagtccatggagctgctggatgaaaggaagttctgggctgggatcgtgttcacagga
atcgctcctggcagtgccgagcttccccatcacgttaagtacaagatccgaatggacatt
gacaacgttgagaggaccaataagatcaaggatgggtactgggacccgggtccccgggct
gacccctttgaggatatgcgctatgtctgggggggcttcgcctacctgcaggatgtggta
gagcaggcgatcatcagagtgctgacaggggctgagaagacaacgggagtctacgtgcaa
cagatgccctacccctgttacgttgacgacattttcctgcgggtgatgagccggtccatg
cccctcttcatgaccctggcctggatttactcggtggctgtcatcatcaagggcatcgtg
tacgagaaggaggcgcggttgaaagagaccatgcggatcatgggcctggacaatggcatt
ctctggtttagctggttcatcagcagcctcatccctctgcttgtgagtgctggcctgctg
gtcatcatcttgaagttaggaaacctgctgccctacagtgaccccagcgtggtgtttgtc
ttcctgtctgtgtttgccgtggtgaccatcctacagtgtttcctcattagcacgctcttc
tcccgggctaacctggcagcagcctgtgggggcatcatctatttcacgctctatctgccc
tacgtcctgtgtgtagcctggcaggactacgtgggcttctccatcaagatcttcgctagt
cttctgtctcccgtggcttttggatttggctgtgaatactttgccctttttgaggagcaa
ggcataggggtgcaatgggacaatctctttgagagcccggtggaggaagacggctttaat
ctcaccaccgcactgtccatgatgctgtttgacaccttcctctatggagtgatgacgtgg
tacatcgaagccgtttttccagggcagtatgggattcccaggccctggtatttcccttgt
accaagtcctactggttcggggaggaaattgaagagaagagtcatcttggttccggccag
aaaggagcatcagaaatctgcatggaagaggaacccactcacctgaggctgggtgtgtcc
atccagaacctggtgaaggtttaccgagatggcatgaaggtggctgtggatggcttggcg
ctcaatttttacgagggccagatcacctccttcctgggtcacaatggagcggggaagacc
accaccatgtcaatcctcactgggttgttccccccaacttctggcaccgcctacattctg
ggaaaggacattcgctctgagatgagttccatccggcagaacctgggcgtctgtccccag
cataatgtgttgtttgacatgctgaccgttgaagagcacatctggttctatgcccgcctg
aaggggctctcggagaagcacgtgaaagcagagatggagcagatggccctggatgtcggc
ttaccccccagcaagctgaagagcaaaaccaaccagctctcaggcgggatgcagaggaaa
ctgtctgtggccttggcctttgtgggtggatccaaggttgtcattctggatgaacccaca
gcaggtgtggacccttactctcgcaggggaatatgggagctcctgctgaagtatcgacaa
ggccgcaccattatcttgtccacacaccacatggatgaagccgacatcctgggggacaga
atcgccatcatttcccatgggaaactgtgctgtgtgggctcctccctatttctgaagaac
cagctgggaacaggttactacctgaccctggtcaagaaagacgtggaatcgtctctcagt
tcctgcaggaacagtagcagcacagtgtcgtgtctgaagaaggtggtgcctgagctcccc
gcagctgggcagagtggaggcggaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctctgctatctccaacctcatcaggaagcatgtgtctgaagcccggctggtggaa
gacatcggccacgagctgacttacgtgctgccgtacgaagctgctaaggaaggggctttc
gtggagctcttccatgagattgacgatcgcctctcagatctgggcatctccagttacggc
atctcagagaccaccctagaagaaatattcctcaaagtggccgaagagagtggggtggat
gcggagacctcagatggtactttgccagcgagacgaaacaggcgggccttcggggacaag
cagagctgtctgcgcccattcactgaggatgatgctatagacccgaatgactctgacata
gacccagaatccagggagacggacctgctcagtgggatggacggcaaaggctcctaccag
ctgaagggctggaaactcacccaacagcagttcgtggcccttctgtggaagaggttgctg
atagccagacggagccggaaagggttctttgctcagattgtcctgccggctgtcttcgtt
tgcattgccctggtcttcagcctgatcgtgccaccctttggcaagtaccccagcctggaa
cttcagccctggatgtataatgaacagtacacgtttgtcagtaatgatgctccaggggac
tcgggcacccagaagctcctgaatgctctgaccagagacccaggcttcgggacccgttgc
atggaaggagacccgattccagataccccttgcttggtgggggaggaagattggagcact
gccccagttccccagaccatcatggacctcttccaatatggcaactggacgatgaagaac
ccctcacccacctgccagtgtagcagtgacaaaatcaagaagatgctgcctgtgtgtccc
ccaggggcaggggggctgccacctcctcagagaaagcaaaacactgccgacatccttcag
aatctgacaggaaggaacatttccgactacctggtgaagacgtacgtgcagatcatagcc
aaaagcttaaagaataagatctgggtgaatgagtttaggtatggtgggttttccctgggt
gccagtaattctcaagcccttcctccgagccgagaagttaatgatgctatcaagcaagtg
aagaaactcttgaagctgaccaaggacagttctgcagatcgttttctcagcagtttggga
aggttcatgacgggactggataccaaaaacaacgtcaaggtgtggttcaataacaagggc
tggcatgccatcagttccttcctgaatgtcatcaacaatgccattctccgggccaaccta
caggagggagagaatccaagccagtatgggatcactgccttcaaccatccgctgaacctc
accaagcagcagctctccgaggtggctctgatgaccacatctgtcgatgtccttgtgtct
atttgtgtcatctttgcgatgtcctttgtcccagccagctttgttgtgttcctgattcag
gagcgggtcagcaaagcaaaacacctgcagttcatcagcggggtgaaacccgtcatctac
tggctctccaatttcgtctgggatatgtgcaattatgtggttcctgctacattggtcatt
atcatcttcatctgcttccagcagaagtcctacgtgtcctccaccaacctgcctgtccta
gcccttctgcttttgctgtatgggtggtcgatcacgcctctcatgtacccagcctccttt
gtgttcaagatccccagcactgcctatgtggtcctcaccagtgtgaacctcttcatcggc
atcaacggcagtgtggccactttcgtactggaactttttaccaacaataagctgaataac
atcaatgacatcctgaagtctgtgttcctgatcttcccacatttttgcctgggacgaggg
ctcattgacatggtgaaaaaccaggccatggctgacgcgctggagaggtttggggagaat
cgctttgtgtctccgctctcttgggacttggtaggacgaaacctttttgccatggccgtg
gaaggggtggttttcttcctcattactgtcctgatccagtacaggttcttcatcaggccc
agacctgtaaaggcgaagcttcctcctctgaacgatgaggatgaggatgtgagacgggag
agacagagaattctggatggcggaggacagaatgacatcctggaaatcaaggagctgacc
aagatctatagacggaagcggaagccggccgttgacaggatttgcgttggcattcctcct
ggcgagtgctttggactcctgggcgttaacggtgctgggaagtcatcaacgttcaagatg
ctgactggagataccactgtgaccagaggggacgctctgcttaacaaaaacagcatctta
tccaacatccacgaagtacatcagaacatgggctactgccctcagtttgatgccatcacc
gagctgctgactgggagagagcacgtggagttctttgccctcttgaggggagtcccagag
aaagaagttggcaaggttggtgaatgggcgattcgcaaactgggccttgtgaagtacgga
gagaaatacgccagcaactatagtggaggcaacaaacgaaagctctccacggccatggct
ttgattggtgggcctcctgtggtctttctggatgaaccaactacaggcatggaccccaaa
gctcggcgattcttgtggaattgcgccttaagcattgtcaaggaggggagatcagtagtt
cttacatctcatagtatggaagaatgtgaagctctgtgcacaaggatggccattatggtc
aatgggaggttcaggtgccttggcagtgtccagcatctgaaaaacaggtttggagatggt
tacacgatagttgtacgaatagcaggctccaaccctgacctcaagcctgtccaggagttc
tttggactagcctttccagggagtgtcctcaaagagaaacaccgaaacatgctacagtac
cagcttccctcctccttgtcgtctctagccaggatattcagcatcctctcccagagcaaa
aagcgactccacatcgaagactactctgtctctcagacaacacttgaccaagtatttgtg
aactttgccaaggaccaaagtgatgatgaccacttaaaggacctgtccttacacaaaaac
cagacagttgtggatgtggctgtcctcacgtcttttttacaagatgagaaagtgaaagaa
agttatgtgtga
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integrated database retrieval system
