Alexandromys fortis (reed vole): 126515506
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Entry
126515506 CDS
T08493
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mfot03036
]
126515506
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126515506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
126515506
NCBI-ProteinID:
XP_050021141
LinkDB
All DBs
Position
Unknown
AA seq
2988 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQIPMEQGFPSLQPPLHHPSAN
QNQTKLTHFDHYNQYEQKMHLMDQPSRMMGSAPGNGLASPHSQFHTPPVPQVPHGGSGGS
QMGVYPGMQSERHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQPPQPAPSGPPAQGHPQHM
PPMGSYMARGDFSMPQHGQPQQRMGQFPQGQEGLSQGNPFIATSGPGHLSHLPQQSPSMA
PSLRHPVQQFHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVPSPTVNNS
GQYSRYPYSNLNQGLVNSTGMNQNLGLTNSSPMNQSVPRYPNAVGFPSSSGQGLRHQQPI
HASGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMPMEVGSY
PNMPHPQPSHQPPGAMGLGQRNIGPRNMQQPRPFMGMSSAPRELTGHMRPNGCPGVGLAD
PQAIQERLIPGPQHPGQQPSFQQLPTCPPLQTHPGLHQSSPPHPHHQPWAQLHPSPQSTP
QKVPVHQHSPSEPFLEKPDMTQVSGQNAQLVKGDDYLPSIEQQPQQKKKKKKNNHIVAGD
PSKSFGKDDFPGGVDNQELSRNSLDGSQEEKKKKKRPKVKKDPKELKEPKEKKEPKTPKA
PKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPP
SPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGGDSPSNTSQSEQQE
SVDAEGPVVEKIMSCRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKRIQ
QKIKRFKSKQGQNKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPY
EDSTWELRQDIDQAKIEEFEQLMSREPETERVERPPADDWKKSESSREYRNNNKLREYQL
EGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWER
EFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPE
LRSIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEP
SRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNI
QKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETH
NAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPY
ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND
LQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQ
QLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKAS
FVVSGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRIRKQTRLYSAVKEDEL
MEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRYKRQ
LTEQDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVPRGR
KGKKVKAQSTQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVI
GDQADKILEGADSSEADVWIPEPFHAEVPADWWDKEADKSLLIGVFKHGYEKYNSMRADP
ALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRVPFKDEIDEFAN
SPPEDKEESLEMHSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMRQEA
LMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVVFDPVKQQFD
WNQFRAFARLDKKSDESFEKYFSCFVAMCRRVCRMPSKPEDEPPDLASLIEPITEERASR
TLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSRTD
YHILNDPELSFLDAHKSFAQNRGAGTVSSLNAVAVGFGQTPQGVSSAHAHEEKVTEQAEV
KAEEAEHSPARERSGGKEEEEEAGGGAKESKQDCETEGNPLKSELKGVEGSAESGSKSVS
EKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYMEDGD
PSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLVPGYTPST
MDSPLQKRSLAELSMVSQASISGSEDITTSPQLSKDDALNLSVPRQRRRRRRKVEIEAER
AAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSKFSSLTSKFILPTASTP
VSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKNVEGLDLFFTSHKRTA
FSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLMGEDAPKNKDLVD
WLKMHPTYTVDMPSYVPKNADALFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKR
NGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEG
ASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAGLM
GFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTTAPQG
EPEDGTSKAEEKGTEHIDENRDSEKSTDAAAVTAADSANGSVGAATAPAALPSNPLAFNP
FLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAAAAVGTSEEKAAEKAEGGPCKE
GETLEGSDAEENLDKTAESSILEDEVAQGEELDSLEGGDEIDHSRNDE
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctctttggcgaggatgggaatatattcagtgagggc
ctggaaggccttggggaatgtggctatcctgaaaacccagtgaaccccatgggtcagcag
atacccatggaacaaggcttcccctctttacagccaccccttcatcatccttccgccaat
cagaatcaaaccaagttgacccattttgatcactataatcagtacgaacagaagatgcat
ctgatggatcagcctagcaggatgatgggcagcgcccctgggaacgggctggcatccccg
cactcgcagttccacacccctcctgttccccaggtgccacacggaggcagcggcggcagt
cagatgggagtctaccccggcatgcagagcgaaaggcatgggcagtcttttgtggacggt
ggctccatgtggggcccgcgggccgtccaggtaccagaccagatccgagccccctaccag
cagcagccaccgcagccagctccgtcggggccgccggcacagggccacccccagcacatg
ccgccgatgggcagctacatggcgcgcggggatttttccatgccgcagcatggccagccg
cagcagaggatgggccagtttccccaaggtcaagagggcctcagccagggaaaccctttc
attgccacctcaggacccggccacttgtcgcacctgccccagcagagccccagcatggcc
ccttccctgcgtcacccggtgcagcagtttcaccacccccctactgctctccacggggag
tccgtggcccacagtcccagattctccccaaatcctcctcaacaaggggccgtccggccg
caaacccttaactttagttctcggagccagacggtcccctcccctactgtaaacaactca
gggcagtactctcgatacccttacagtaacctaaatcagggattagttaacagtacaggg
atgaatcagaacttaggccttacaaacagttctccaatgaatcagtccgtaccaagatac
cccaacgctgtaggattcccgtcaagcagtggtcaaggactaaggcaccagcagcccatc
cacgccagtggctcacttaaccaaatgaacacacaaactatgcatccttcacagcctcag
ggaacttatgcctctccacctcccatgtcacccatgaaagcaatgagtaatccagcaggc
acgcctcctccgcaagtcaggcccggaagtgctgggatgcccatggaagttggcagttat
ccaaatatgccccaccctcagccatctcaccagccccctggtgccatgggactcggacag
aggaatataggccccagaaacatgcagcagcctcgtccattcatgggcatgtcctcggca
ccgagggagttgaccgggcacatgagaccaaacggttgtcctggtgttggccttgcagat
ccacaagccatccaggagcgactgatccccggcccacagcatcctggtcaacagccatct
tttcagcagctgccaacctgccctccactccagacccacccaggcttacatcagtcttcc
ccgccacaccctcatcaccagccttgggcacaactccacccgtcaccccagagtaccccg
cagaaagtgcctgtgcatcagcattctccgtcggagccctttctagagaagccggacatg
actcaggtcagcggacagaacgctcagctggtgaagggcgacgattacctgccgtcaata
gaacagcagccacagcagaaaaagaagaaaaagaaaaacaaccacattgttgcaggggat
cccagtaaaagttttggtaaagatgacttccctggtggggttgataaccaagaactaagt
aggaactcgctggatgggtcccaagaagaaaaaaagaaaaagaaaaggccgaaagtcaaa
aaagatccgaaggaattgaaggaaccgaaggagaagaaagagcccaagaccccaaaagcc
ccgaagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacaccaaaacccaaa
tccagcaaaaagtcaagtaataagaagccggactcagaagcaagtgctttgaagaaaaag
gtcaacaaaggaaaaacagaaggttctgaaaactcagacttggacaaaacacccccaccg
tcccctgcccctgaagaggacgaagacccaggtgttcagaagaggcggtccagcaggcag
gtgaagcggaagcgatacactgaagacttggagttcaagatttctgatgaggaggcagat
gatgcagatgctgctgggggagactctccatccaacacctcacagtcggagcagcaggaa
tctgttgatgcagaaggcccagtggtagagaagatcatgagctgtcgttcagtgaagaag
cagaaagaatctggcgaggaggtggaagttgaagagttttacgtaaagtacaaaaacttc
tcttatcttcattgtcagtgggcgtctgtggaagatctggagaaagataagagaattcag
caaaagataaaacgatttaagtcaaaacagggccagaacaaattcctttcagagattgag
gatgatcttttcaatccagactatgtggaagttgaccggataatggactttgcacgtagc
acagatgaccggggcgagcctgtgacccactatctggtgaagtggtgctcgctcccttac
gaagacagcacatgggagctgaggcaggacatcgatcaagcgaagatcgaagagttcgag
cagctcatgtccagggagccggaaacagagcgtgtggagcgacctcctgctgatgattgg
aagaagtcggagagttccagggagtatagaaacaataacaaactcagggaataccagttg
gagggagtgaactggctacttttcaattggtacaacatgcgaaactgcattttagcagat
gaaatgggtttgggaaagactatccagtccattacatttctctatgagatatatttgaaa
ggaatccatggcccttttttagtaatcgccccattgtccacgatccccaactgggaaagg
gaattccgaacctggacggagctaaacgtggttgtgtatcatgggagccaagctagtcgt
cggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgataaagggg
tcctataagtttcatgccatcatcactactttcgagatgatcctgacggactgtcctgag
ctgcgcagtatcccctggcgctgtgtggtcatcgacgaagcccacaggctgaagaacagg
aactgcaagctgctggaaggactgaagatgatggacttggaacacaaagtgctgctgacg
gggaccccgctgcagaacaccgtggaagagctcttcagcctgctccatttcttggagcca
agtcgcttcccttcagaaacaaccttcatgcaagaatttggtgatctgaaaacagaagaa
caggtgcaaaaactacaggctattctaaagccaatgatgttgagacgtctcaaagaggat
gtagaaaagaacttggcccccaaagaagaaactattattgaagttgagctaacaaacatt
cagaagaaatattaccgagccatccttgagaagaattttacatttctttccaaaggtggt
ggacaagctaacgtacctaaccttttaaacactatgatggaactgagaaagtgctgcaat
cacccctatctaatcaatggtgctgaagagaaaattttggaagagtttaaagaaacgcac
aatgcagagtctccagattttcagctccaggcaatgatccaggctgctggcaagctggtg
ctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgcttatcttctcc
cagatggtgcgctgcttggacatcctggaagactatctcattcagagacggtatccatac
gaaaggatcgatggccgagtcagaggcaacctccgccaggcagccatcgacaggttctcc
aaacctgattctgataggtttgttttcctcctgtgcacacgggcaggaggtctaggcatt
aatctcactgctgctgatacctgcatcatctttgactcggactggaatccccagaacgac
ctccaggctcaggctcgatgccacagaatagggcagagcaagtctgtcaaaatctacagg
ctgataacgagaaactcctacgaaagggaaatgtttgacaaggctagtttgaagctgggc
ctggacaaagctgtgctgcagtctatgagtggaagagaaaatgccaccaacggggttcaa
cagctttccaagaaggagatagaagaccttctacgaaagggagcttatggtgcacttatg
gacgaggaagacgaagggtcgaagttctgtgaagaggacattgaccagattctccttcgt
cgaacccacactatcaccattgagtctgaaggaaaagggtccacgtttgctaaggccagc
tttgttgtatctggaaataggacagatatttctttggatgacccaaatttctggcagaag
tgggctaagaaggctgaactggacatcgatgccttaaatgggaggaacaacctggtcata
gacactccacgaataaggaagcagacccggctgtacagtgccgtgaaggaggatgagctg
atggagttctctgacctggaaagtgattccgaagaaaagccttgcgccaagccacggcgc
cctcaggacaagtcccagggctatgccaggagcgagtgtttccgggtggagaagaacctg
ctggtctacggctggggccgctggacagacatcttgtcccatggacggtacaaacgtcag
ctcactgagcaagacgtagaaaccatctgcagagccatcctggtgtactgtctcaatcac
taccgcggggacgagaacatcaagagctttatctgggacctgatcactccgacagccgac
ggccaaactcgagccctgctcaatcattccggtctgtcggcccctgtgccaaggggccgg
aaggggaagaaggtaaaggcccagagtacgcagccggtagtgcaggatgcggactggctg
gcgagctgcaacccagacgccctgttccaggaggacagctacaagaaacacctgaagcac
cactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaagaagtgata
ggcgaccaggcagataagatcctcgagggtgctgactctagtgaagcagacgtgtggatc
cctgagcctttccatgcggaagttcctgcagattggtgggataaggaagcagacaaatcc
ctgctgatcggagtgttcaaacatggctatgagaagtacaattccatgcgagctgaccct
gcactgtgcttcctggaacgagttggtatgcctgacgccaaggccatcgctgccgagcaa
agagggacagacatgctagcagatggcggtgacggtggagaatttgatagagaagatgaa
gatccagaatataagccaaccagagtgccattcaaagacgaaatagatgagtttgcaaat
tctcccccagaggataaggaggagtccctggaaatgcacagcacaggcaagcacagcgag
agcaacgctgagttaggtcaactctactggcctaacacgtcaaccctgactacacgcctg
cgccggctcattactgcctatcagcgcagctataaaaggcaacaaatgaggcaggaggcc
ctaatgaagacagaccggcggagacggaggcctcgggaggaagtgcgagctctggaggcg
gaaagggaagctattatatctgagaagaggcaaaagtggacgagaagagaagaagctgat
ttttaccgtgtggtgtccacttttggggttgttttcgaccctgtgaagcagcagtttgac
tggaaccagttccgcgcctttgccaggctggacaaaaaatctgatgagagctttgagaag
tacttcagctgttttgtggccatgtgcaggcgggtgtgtcggatgccctccaagcccgag
gacgagccacccgacctggcctccctcatcgagcccatcactgaggaacgagcatcgagg
accctgtaccgcattgagctgctgcgcaagatccgagagcaagtcctccaccacccacag
ctgagtgacaggctgaagctctgccagcccagcctggacctgcctgagtggtgggaatgt
ggacggcatgacagggacctgctggtgggcgctgctaagcacggggtcagccggaccgac
taccacatcctcaacgaccctgagttgtccttcctcgatgcacacaaaagctttgctcag
aaccgtggggccgggaccgtctcttccttgaacgctgtggccgtgggctttggccagact
cctcaaggcgtttcctcggctcatgctcacgaagagaaggtaactgagcaggccgaggtc
aaggcagaggaagctgaacactcaccggctagagagaggtcgggtgggaaagaggaggaa
gaagaagctggtggtggggccaaggagagcaagcaggattgcgagactgagggcaaccca
ctgaagagcgaactcaaaggggtagagggcagtgcagagtccgggtccaagtccgtctcg
gagaaaggctcagaagaggatgaggaagagaagctggaggatgacgacaagtcagaggag
tcttcgcagcccgaagcaggagctgtctccagagggaagaattttgatgaagaaagcaat
gcttccatgagcactgcgagggacgagacccgagatggattctacatggaagacggagac
ccttctgtggctcagctccttcacgaacgaacctttgctttttcgttctggcccaaggac
agagtaatgataaaccgattagacaacatctgtgaagccgtactcaaaggcaaatggcca
gtcaaccggcgccagatgtttgacttccagggcctcgtccctggttacacaccctccacc
atggacagtcccttgcagaagaggagtttggccgagctctccatggtcagccaggccagc
atcagcgggagtgaggacatcaccacgtctcctcagttgtccaaggatgacgcccttaac
ctgtccgtccctcgccagcggcggcggcgaaggaggaaagtcgaaatagaggccgaaaga
gctgccaagaggcgaaatcttatggagatggttgcccagcttcgagagtctcaggtggtc
tcagaaaacggacaagaaaaagttgtggacttatcaaaggcctcaagggaggcaacaagt
tctacctcaaagttttcatctcttacttcgaagtttatcttgcctaccgcgtctacgcca
gtgtccgatgcctttaagacccagatggaactgctgcaggccggcctttcgcgcaccccc
accaggcatctgctcaatggctccctaatggatggagagcctcccatgaagaggaggcgg
ggcaggaggaaaaacgtggagggcctcgacctgttcttcacgagccacaaacggacagcg
ttcagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagaccccacca
atacgaaacattccttctcctggacagctggaccctgacacacggatccctgtgataaac
cttgaagacgggacaaggctgatgggagaagacgctcctaaaaacaaggacttggttgac
tggctcaagatgcatcctacttacactgtcgatatgcccagttatgtaccaaagaatgca
gatgcgctgttttcctcgtttcagaaaccgaaacagaaacgacatagatgtcggaatcct
aataaattggatataaacactttgaccggggaggagagggtcccagttgttaacaaacgg
aatgggaagaagatgggtggagccatggcccctccaatgaaggaccttcccagatggctg
gaggagaaccctgagtttgcagtcgctccagactggactgatatagtcaagcaatctggt
tttgtccccgagtccatgtttgaccgtcttctcactggacctgtggtgcggggagaagga
gccagccggagaggacggaggcccaaaagcgagatcgcccgggcggcggctgcggccgct
gctgtggcctctacttcagggatcaaccctctgttagtgaacagcctgtttgctgggatg
gacctgacgagcctgcagaatctccagaacctccagtccctccagctggcagggctcatg
ggcttccctccaggactggccacagctgccacggccggaggcgacgcgaagaaccccgct
gccgtgctccccctgatgctgccaggcatggcaggcctgcccaacgtgttcggcctgggc
gggctgctgaacaaccctctctcagctgctactggaaacaccactactgctccgcaagga
gagcccgaggacggcacctccaaggcggaagagaaaggaaccgagcacatagacgagaac
cgagactcggagaaaagcacagacgccgccgccgttacggctgccgactcggcaaacgga
tctgttggtgctgctactgccccggctgcattgccctccaacccgctggccttcaaccct
ttcctcctgtccaccatggccccaggcctcttctacccatccatgtttctacctccagga
ctggggggattgacactgcccggcttcccggcgctggcgggactgcagaacgccgccgcc
gccgtgggtaccagtgaagaaaaggctgctgagaaggccgagggaggcccctgtaaagaa
ggagagaccctggaaggcagcgatgccgaggagaacctggacaagactgcggagtcctcc
atcttggaagacgaggttgcacagggtgaagagctggactccctcgaaggcggggatgag
atagaccacagcagaaatgacgagtag
DBGET
integrated database retrieval system
