Mycoplasmopsis fermentans PG18: MBIO_0540
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Entry
MBIO_0540 CDS
T02594
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfp
Mycoplasmopsis fermentans PG18
Pathway
mfp03030
DNA replication
mfp03430
Mismatch repair
mfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBIO_0540
03430 Mismatch repair
MBIO_0540
03440 Homologous recombination
MBIO_0540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfp03032
]
MBIO_0540
03400 DNA repair and recombination proteins [BR:
mfp03400
]
MBIO_0540
Enzymes [BR:
mfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MBIO_0540
DNA replication proteins [BR:
mfp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MBIO_0540
DNA repair and recombination proteins [BR:
mfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MBIO_0540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
15167771
NCBI-ProteinID:
BAH69805
UniProt:
C4XF83
LinkDB
All DBs
Position
594157..597060
Genome browser
AA seq
967 aa
AA seq
DB search
MKKYVNLYNTSEYTFLDSLIRIDDLVRLSKEHNLPAVVLSDRNNMFGLGAFMEACLKYDI
KGIIGVDLDVDNYRFIVLAKNYQGYQKINQLIYQKSINKAIEISELWNPNLIVLDHPRYG
YYAQTKDNKYSASKNYYINSSDASLPNSILIKENKLFEASDNETLNYLQKLGNLEETKHY
ANYFDEVNVDSEIIDRIYSIINECNVIFPKKALHLAPFQNNDEATNEKLFVSLLKAGAKR
LASELKNYPDWNKRLEYEFNVIKKLGYINYFLIIQDLVNWAKSQKIAIGPGRGSAAGSLV
SYLLNITEINPLRYNLLFERFLNPDRVSWPDIDIDIQDDRRFEVFEYLQKKYGVDKTGLI
STFQTIGAKMAIRDMGRVMGISLIDINRISKTIKSDNLTDAYKNDIDFKIEMDNYPELYK
HALKIEGLPRQQSFHAAGFIIAKDKLFNYVPVCLSNLDNYQQVQVPMNYIESYGLLKIDL
LGLRTLTEIQLIEKSLEENQKFDYLVKNDPQILNDPKTLTMLNLGFTEGIFQLESPGMKK
TIQKVVLNSFDDLYAIISLFRPGPMDFINDYATNKKNQKLIKKIHPDYDKVVANTYGIIV
YQEQIMQIAQSIGGMTFAQADLLRKAISKKSEVDIKKYRSIFFENAIKKGINEKIINAIY
NNIEKFGLYGFNKSHAVSYAYLTMKMSYYKARYANLFYSSLITNAAGAQATINKYVAEIK
KLNFPVYSPNILHSSNKCIVTNDGIYLPFEMIKGFGAEGVNKIVADLNENGPFQKNLIDT
MLRLRFAGIKDAAMEILIKANAFRDFGHMKYILSCDNQIKDIFKVLSSHSTYKEALKDIQ
KMGYYDIVFDQENERDINYEMDYEIALLGELYNAFSTSIYEAKYKNKLNTITSSIPVSVA
AEVADLRRPRGKEFSVLELRDSTAKITFFVNNKVLASSLPLKKGQIIEATISFSRNKHNL
ISWKGIQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacgtcaatttatacaatacaagtgaatacacttttttagattctttaatt
agaatagatgatttagttagattatcaaaagaacacaatcttcctgcagtagttttaagt
gaccgaaacaatatgttcggtttaggtgcttttatggaagcatgcttaaaatatgatatc
aaaggtatcattggagtggacttagatgtagacaattatcgcttcatagtcttagcgaaa
aactaccaaggttaccaaaaaattaatcaactaatttatcaaaaaagtattaataaagct
attgaaattagtgaattatgaaatcccaatttaatagttttagatcatccaaggtatggt
tactatgctcaaactaaagataataaatatagtgcaagtaaaaactactatattaattct
tcagatgcttcattacctaactctatattaataaaagaaaataaactttttgaagctagt
gataatgaaactctaaattacttacaaaaattaggcaatttagaagaaactaaacactat
gccaactattttgatgaagttaatgtagatagcgaaataattgaccgtatttattcaata
attaatgaatgcaatgttatttttcctaaaaaggccttgcatttagctccttttcaaaat
aatgatgaagctaccaatgaaaagctttttgtttcacttttaaaagcaggcgctaaaaga
ctagcaagtgaattaaaaaattatccagactgaaacaaaagacttgaatatgagtttaat
gtcattaaaaaacttggttatattaactactttttaattattcaagatttagttaactga
gctaaaagtcaaaaaatagcaataggacctggtcgtggtagtgcagcaggttcacttgtt
tcttatcttttaaatataactgaaattaatccattaagatataacttactttttgaaaga
tttttaaaccctgatagagtttcatggcctgacattgatatagatattcaagatgatcgt
cgttttgaagtttttgaatatttacaaaaaaaatatggagtagataaaactggacttatt
tcaacttttcaaactattggtgctaaaatggcaattagagatatgggcagagttatggga
attagcttaattgacatcaaccgcatcagtaaaactattaaatcagataacttaactgat
gcttataaaaatgatattgactttaaaattgaaatggataattatcctgagttatataaa
catgcacttaaaatcgaaggcttacctcgtcaacaaagtttccatgcagcaggttttatt
attgctaaggacaaattatttaattatgtccctgtttgtttaagcaatttagacaattac
caacaggtacaagtaccaatgaattacatagagagttatggacttttaaaaattgacttg
ctaggtttaagaactttaactgaaattcagctaattgaaaaaagtttagaagaaaaccaa
aaatttgattatttagtaaaaaacgatcctcaaattttaaatgatcctaaaactttaaca
atgctcaacttaggttttactgaaggaatatttcaattagaatctccgggcatgaagaag
acaattcaaaaagttgtcttgaattcttttgatgatttatatgccattatttcattattt
agacctggacctatggactttatcaatgactatgcaactaataagaaaaatcaaaaatta
attaaaaaaatacatcctgattatgacaaagttgttgccaacacatatggcataatagtt
tatcaagaacaaattatgcaaatagctcaaagtattggcggaatgacttttgctcaagct
gatttattgcgtaaagcaattagcaaaaaaagtgaagttgatatcaaaaaatatagaagc
atattttttgaaaatgccattaaaaaaggcataaacgaaaaaattattaatgctatttat
aacaatattgaaaaatttggactatacggttttaataaatctcatgctgttagttatgca
tatttaactatgaaaatgtcatactataaagctcgttatgctaacttattttatagctct
ttaattacaaatgcagctggagcacaagctacaattaataaatatgtagctgaaattaag
aaacttaattttccagtttattcgccaaatattttgcattcaagtaataaatgtatagta
acaaacgatggcatttatttaccttttgaaatgattaaaggttttggagctgaaggtgtt
aataaaattgtggctgatttaaatgaaaatggaccatttcaaaagaatttaattgataca
atgcttagacttcgttttgcaggtattaaagatgctgctatggaaatattaattaaagcc
aatgcttttagagactttggacacatgaaatatatactatcttgtgataatcaaattaaa
gacatttttaaggttttatcttcacattcaacttataaagaagcattaaaagatattcaa
aaaatgggttactatgatatagtttttgatcaagaaaatgaacgtgacataaattacgaa
atggactatgaaatagctcttttaggtgaattatacaatgcttttagtacttcaatttat
gaagcaaaatacaaaaataaattaaatacaataacctcttcaattcctgtttctgttgct
gctgaagtagctgatttaagaagaccaagaggtaaagaatttagcgttttagaattaaga
gatagtacagctaaaattactttctttgttaacaacaaagtattggcaagctcacttcct
cttaaaaaaggacaaataattgaagctacaattagtttcagtcgcaacaaacataattta
attagctgaaaaggaattcaataa
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