Mycoplasmopsis fermentans PG18: MBIO_0596
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Entry
MBIO_0596 CDS
T02594
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mfp
Mycoplasmopsis fermentans PG18
Pathway
mfp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBIO_0596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfp03400
]
MBIO_0596
Enzymes [BR:
mfp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MBIO_0596
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MBIO_0596
DNA repair and recombination proteins [BR:
mfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MBIO_0596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Pep3_Vps18
DUF4905
W02B3_4_N
DUF3116
zf-FPG_IleRS
Cadherin
Motif
Other DBs
NCBI-GeneID:
15167827
NCBI-ProteinID:
BAH69861
UniProt:
C4XFD9
LinkDB
All DBs
Position
664601..665425
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AA seq
274 aa
AA seq
DB search
MMPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAK
HIIFSLTNNKYLLSHLRMSGKYFTHYKYRPATKHDYLIFHLDDNSCIYYNDSRQFGTFHI
KTKGTLYTTKPLDKVAKIPSETNIKELFNKIKNKNIPIKQLLLDQSFVSGIGNIYANETL
FATQINPLTPSKNITFEQLEKIIKAAAKIMDQATELGGSSIDTYTSVDGVKGQFQDFLQV
HGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
attatgccagaattaccagaagttagaagtgtggtcaaagatttaagacctaaagttgtt
aatagaaaaatagttaaaattgatatcttacatcctaaattaattaaagaggtaagtgtt
gaagaattcaagaattttttaattaatgaaacatttttagatgtcaataatttagctaaa
catattattttttctttaacaaataataaatatttattaagccacttgagaatgagtgga
aagtattttacacattataaatatcgtccagcaacaaaacatgattacttaatttttcat
cttgatgataatagttgtatttattataatgactcacgtcaatttggcacttttcatata
aaaactaagggcactttatatacaactaaacctttagataaagttgcaaaaattccttca
gaaacaaatattaaagagttatttaataaaattaaaaataagaatatacctataaaacag
cttcttttggatcaaagctttgtttcaggtattggaaatatttatgctaatgaaacttta
tttgccactcaaattaatcctttgacgccttcaaaaaatataacttttgaacagttagaa
aaaattattaaagcagctgcaaaaattatggatcaagctactgaattaggtggttcaagc
attgacacatatacttcagttgatggagttaaaggtcaatttcaagattttttacaagtt
catggacactttaatgatgtatgtaaaagatgtaaaaaagctaaaattaataaaattttt
attaacaaaagagggacttattattgtccaaattatcaaaaataa
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