Mesomycoplasma flocculare: MYF_00045
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Entry
MYF_00045 CDS
T03538
Name
(GenBank) putative ribonuclease-thioredoxin fusion protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mfq
Mesomycoplasma flocculare
Pathway
mfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYF_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfq03019
]
MYF_00045
Messenger RNA biogenesis [BR:
mfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYF_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
RNase_J_C
RNase_J_b_CASP
Thioredoxin_2
Thioredoxin_9
TXD17-like_Trx
RMMBL
CHAT
Motif
Other DBs
NCBI-ProteinID:
AJC49591
UniProt:
A0A0A8EBU3
LinkDB
All DBs
Position
9000..11021
Genome browser
AA seq
673 aa
AA seq
DB search
MAKISFFALGGQDENGKNCYILEIDDNIFILNSGAKIPLDSSVGIDTIIADFTYIEENQH
KVRGIFITDAKNESFSALPWLIMKLKTAKIYSSFFTKALIIDRISKYRLSESSFEVKPIT
TELKISEKISVFSFPVAGSMPGTIGFCFQTEDGAIVFMSNYVVGNLGVYGITDFDLIKKV
SANPKGILMFISDSGKSNLPGKAINKLFAKNFLEKFFLKADKNSRIVVSAYDEEMISIQE
IIDLSVKFNRQITAYGKKYDKLYDMIYKLDKLTTNNLKNFPMFFDYKYANKQKNSVILIT
SSPERICHRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTASIVDI
SESDFGLARPYKEDISEMIQILKPKYFLPIQGLYRYLIVASNIAVNNKIKKQNIIVLQNK
RVANFLDGNLFSRKKISKGQDEIYISGFGVGDVSFEVLKERENLSRDGLIIISFLFDPVS
KKILSIPEITDYGILSKENRESYFEIIRKIIFNNFSNLKKINDKILKELQQKTQKNIKRK
LFRMFDKEPSVSVLIHNIYSEEKKMKKLPWKQAENELKTGVVYLEFAVDWCGDCKMQEPV
NDELAKYFKDRKDVKLIKVDAEESKLFRQKGTKYDVLFVPTHFIFKNGEIVFKKFNYVPA
EILIENIEKAVNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattagtttttttgcccttggtggtcaagatgaaaacggaaaaaattgctat
atattagaaattgatgataatatttttattcttaattccggtgcaaaaatacccctagat
agctcggttggaattgacacaattattgcagattttacctatattgaagaaaatcaacat
aaagttaggggcatttttataacagatgctaaaaacgaatctttttcagcgcttccatga
ctgataatgaaactaaaaaccgccaagatttatagctctttttttactaaagcgttaatt
attgacagaatcagcaaatatagactttcagagtcatcttttgaggttaaaccaataact
actgagttaaaaattagcgaaaaaatatcagttttttcttttccagttgcaggttcgatg
ccaggaactatcggtttttgttttcaaacagaagatggggcaattgtttttatgtcaaat
tatgtggttggaaatttgggcgtttatggaattacagattttgatttaataaaaaaagtt
agcgcaaatccgaagggaattttaatgtttatttcggattcaggtaagtcaaacttgcca
ggaaaagcaataaataaactgtttgcgaaaaacttcttagaaaagttttttttaaaagct
gataaaaattctcgaattgtcgtttctgcttacgatgaagaaatgatatcaatacaagaa
attatcgatctttctgttaaatttaatcgtcaaattaccgcgtatgggaaaaaatatgac
aaattatatgacatgatttacaaattagataagctaacaacaaataacttgaaaaatttt
ccaatgttttttgattacaaatatgcaaataaacaaaaaaattctgtaattctaataaca
tcgagtccagaacgaatttgccaccgttttaatcgcattctcgaaaatgatgatgtttat
tttaaattaaaaaaatcagattatgtaattatgttaacaccaccaatcaacggaatggag
caactttatgcaaaagtgcttgaccaaattgctaaatcaacagcaagtattgttgatatt
tcagaatcagattttggactagctcgtccttataaagaagatatttcagaaatgattcag
attttaaaaccaaagtattttcttccgattcaggggctttatcgctatttaattgtagct
tcaaatatcgcagttaataacaaaatcaaaaagcaaaatattattgttctgcaaaataaa
agagttgctaattttctagatggaaatttattttcccgaaaaaaaatctcaaaagggcaa
gacgaaatttatatatcaggctttggtgttggggatgtttcttttgaggtgcttaaagag
cgagaaaatttatcgcgtgatggtttaattattatttcatttttgtttgatccagtttct
aaaaaaatcctttcaattcccgaaattacagattatggaattttaagtaaggaaaaccgc
gaatcttattttgaaataattcgaaagattatttttaataatttttcgaatcttaaaaaa
ataaatgataaaatactcaaagaattacaacaaaaaacacaaaaaaatattaaacgcaaa
cttttccgaatgtttgataaagaaccaagtgtttcggttctgattcacaatatttattct
gaggagaaaaaaatgaagaaacttccatgaaaacaagcagaaaacgagctaaaaactggt
gttgtttatttagaatttgccgttgattggtgcggggattgtaaaatgcaagagcctgta
aatgatgaattagcgaaatatttcaaagatcgaaaagatgtaaaattaattaaagttgat
gctgaagaatcaaaactttttcgtcaaaaaggtacaaaatatgatgttttatttgtgcca
actcattttatttttaaaaacggtgagattgtttttaaaaagtttaattatgttccagct
gaaattttaattgaaaacattgaaaaagctgttaattcatag
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