Mycoplasmopsis fermentans JER: MFE_04400
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Entry
MFE_04400 CDS
T01325
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfr
Mycoplasmopsis fermentans JER
Pathway
mfr03420
Nucleotide excision repair
mfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MFE_04400 (pcrA)
03430 Mismatch repair
MFE_04400 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfr03400
]
MFE_04400 (pcrA)
Enzymes [BR:
mfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFE_04400 (pcrA)
DNA repair and recombination proteins [BR:
mfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MFE_04400 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MFE_04400 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
RXLR
Sugar-bind
PcrA_UvrD_tudor
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADN69036
LinkDB
All DBs
Position
complement(515465..517636)
Genome browser
AA seq
723 aa
AA seq
DB search
MSKRDEILNSLNAEQKEALMYFDGPLRIIAGAGSGKTRVLTRKVAYLINELGISPRSILA
VTFTNKAANEMSERVKQYVGEEANQIDICTFHSLSSKILRKEAIHVNLSNDFQIIDETDK
KTIIAQLYKAEGISNEDVSYKNVMKIFSWAKNQGFSEDEIVKELDAKEKHRSNALVGKIY
SKYNQYLTSKKCLDFDDLIIKVKELFDNFPEVAKIWSKKYSYVLVDEFQDTSTIQYDIVK
YLSSNAQLTIVGDPDQTIYGWRGADVNLILDFDKDFKNTKTIILNTNYRSTKTILDAANK
LIKHNKKRFSKDLITNREQGAPIEFIHAFSVEAEARWVVQKINELKKQKIQLKNIAIFYR
SNYYSRPFEEELINENINHKIFNGQKFFQRTEVKNALAFLRVIYDGSDVSLNRIINVPNR
KIGEVTLKKLQEAANNKKLTLYSYLIKYYKELPVPLNVKNNIVKFLNKINLYRQALKSNS
ISVVLDKFLKEIGYYEHIEEETSLRGTAKDNVAELIRSIVTWEKKNPNKSIKEYLESVSL
LSAGDEYDNFTNYVTLMTVHSAKGLEFDNIFLVGMSDQIFPNYKSLKSNSDDALEEERRL
AYVAITRARNRLFISDSRGYLIGTDLEKKPSRFIREMGIELKNFILKTGSVGLDFDEIVD
EKQIKALNKKIIVGDIISHTFFGEGQVVAVENDTISVRFTGQKTIKVLAKNHASIRLLKN
TDD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgagatgaaattttgaattcattaaatgctgaacaaaaagaagctttaatg
tattttgatggtcctttaagaatcatcgctggagctggaagtggtaaaactagagtttta
actaggaaggtggcttatttaattaatgaacttggaattagcccacgttcaattttagca
gtgactttcactaataaagctgcgaacgaaatgagcgaacgtgttaaacaatacgtcggc
gaagaagctaatcaaatcgatatttgtactttccactctttaagctcaaagattttaagg
aaggaagctattcatgttaatttaagtaatgacttccaaattattgatgaaacagataag
aagacaattattgctcaactttataaagctgaaggcatttcaaatgaagatgtttcatac
aaaaatgttatgaagattttctcatgagccaagaaccaaggctttagtgaagacgaaatt
gttaaagaattagatgctaaagaaaagcatagatctaatgcactcgttggaaaaatttat
tctaaatataatcaatatttaacaagcaaaaaatgtctcgattttgatgacttaattatc
aaagttaaggaattatttgacaacttccctgaagtggcaaaaatttgaagtaaaaaatat
tcatatgttttagttgatgaattccaagacacttcaactatccaatatgatattgttaaa
tacttatcttcaaatgctcaattaacaattgttggtgatcctgaccaaactatttatggt
tgaagaggagctgatgttaatttgatccttgattttgataaggatttcaagaatactaaa
acgattattttaaatacaaattaccgctcaactaaaacaattttagatgcagctaacaaa
ttaatcaaacacaacaaaaaacgttttagtaaagatctaataacaaatcgtgaacaagga
gcaccaatagaatttattcatgcttttagtgtcgaagctgaagctagatgagtggtccaa
aaaattaatgaattaaagaaacaaaaaattcagcttaaaaatattgctattttttaccgt
tcaaattattattcgcgtcctttcgaagaagaattaattaatgaaaatattaaccacaag
atttttaatggtcaaaaattcttccaaagaactgaagttaagaatgctctagcattttta
agagttatctatgatggctctgatgtttcattaaatagaataattaatgttccaaaccgt
aaaatcggagaagtaactcttaaaaaattacaagaagcagcaaataataaaaaattaact
ctctattcatatttaattaaatattacaaggaattgccagtacctttaaatgttaaaaac
aacattgttaagtttcttaacaaaatcaacctttatcgtcaagctttaaaaagcaactca
attagtgttgttttagataaattcttaaaggaaattggctactatgaacatatagaagaa
gaaacctcacttcgtggcactgctaaagataatgttgctgaattaattcgctcaatagta
acttgagaaaagaagaatccaaataagagtattaaagaatacttagaatcagtttcacta
ctttcagcaggtgatgaatatgataactttacaaattatgtaacacttatgacagtccac
tctgctaaaggattagaatttgacaatatctttttagtgggaatgagtgatcaaattttc
cctaactataaatcattaaaatcaaactcagatgatgctttagaagaagaaagaagactt
gcttatgtggcaattaccagagcaagaaatagattatttattagcgatagtcgtggatat
ttaattggtacagatttagaaaagaaaccatcacgttttattcgtgaaatgggaattgaa
cttaaaaactttattcttaaaacaggttctgttggccttgattttgatgaaatagttgac
gaaaaacaaataaaagctttgaacaaaaaaattatagtaggtgacattattagccacacc
ttctttggcgaaggccaagttgtggctgttgaaaacgatacaattagcgttagattcaca
ggacaaaaaacaatcaaagttttagctaaaaatcacgcttcaattcgacttttaaaaaat
acagatgattaa
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