Magnetovirga frankeli: D5125_00410
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Entry
D5125_00410 CDS
T11075
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mfra Magnetovirga frankeli
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mfra01002
]
D5125_00410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mfra01011
]
D5125_00410
Peptidases and inhibitors [BR:
mfra01002
]
Cysteine peptidases
Family C82
D5125_00410
Peptidoglycan biosynthesis and degradation proteins [BR:
mfra01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
D5125_00410
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GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QFY88064
UniProt:
A0A5Q0EGS6
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Position
complement(2680153..2681910)
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AA seq
585 aa
AA seq
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MYPTHRDLPKLGLAGLLLLLLLPPAAQASAFRATLERLLPDDGQPIAKLADGETLYGKVF
ILRMYAANGFKHLWTPAAIRSLDQALLGLADDGLEPSDYRFAEILPFLQSPSRNRYSLEE
TARIDILLTEAYLRALYHLYYGKADPQGVDPDNNFGQARDGKDRSALLLAWVRKGRIDQA
YDWARPDNRRYRQLKQGLQRYRAIAADGGWPQLAKGDSLRPGDRDGRIPAIRRRLAISGD
LASGQGDERYDPTLLDGVKAFQQRHGLEVDGIIGPATLAAMNAPVAERIQQIRVNLERQR
WILHEDKGEFLAVDIAGFMIYWFREGQVIWREQVQVGKRFTNTPAFKDQVEYIDFNPTWT
IPPGILRRSILPELKKDPGYLDKKGYQLLSQKGARLDPHAIDWKGMSHFPYLVRQPPGPD
NALGVVKFMFPNKHHVFVHDTNHREYFARQVRTTSSGCIRLRNPLDLAERLLAGQGWTRA
RIQQVIASGKTTRVNLKQPMRILIVYSTAFADANRVHFKQDIYNRDPRVLSALQGPFRFH
QRDLKSGALVKPASMGDSEIGSDALEIEQEPARPSAGFGSPGFLE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaacccacagagatctgcccaagctggggctggcaggcctgctgctcttgctg
ctgttgccgccagcggcccaggccagtgcctttcgcgccaccctggagcgcctgctgccc
gatgatggccagccgatcgccaagctggccgacggcgaaaccctctacggcaaggtgttc
atcctgcgcatgtatgccgccaacggcttcaagcatctatggaccccggcggcgattcgc
tccctggatcaggccctgcttggcctggccgatgatggcctggagccaagcgattaccgc
tttgccgagatcctgccctttttgcagtcccccagccgcaatcgctacagcctggaagag
acggcgcgtatcgatatactgctcactgaggcctatctgcgcgcactttatcacctgtac
tacggcaaggccgacccccagggggtggatccggacaacaacttcggccaggcccgtgat
ggcaaagacagatcagccctgttgctggcctgggtacgcaaggggcgcatcgatcaggcc
tatgactgggccaggccggacaaccgccgttaccggcagctgaaacaggggctacagcgt
tatcgggcgattgccgctgacggcggttggccgcaactggcaaagggcgacagcctgcgc
cccggcgaccgggatggacgcatcccggccatccgccgacgtctggccattagcggcgat
ctggcctcgggccagggtgatgagcgctacgacccgaccctgctggatggcgtcaaggcc
tttcagcaacgccacgggctggaggtggatggcatcataggcccagccaccctggcggca
atgaatgcgccggtggccgagcgcatccagcagatccgcgttaatctggagcgccagcgc
tggatcctgcacgaggacaagggcgagttcctggcggtggatatcgccggcttcatgatc
tactggttcagggaaggacaggtcatctggcgcgaacaggtgcaggtgggcaagcgcttc
accaataccccggccttcaaggaccaagtggaatacatcgacttcaaccccacctggacc
atacccccaggcatcctcaggcgcagcatactgccggaattgaaaaaagacccaggctac
ctggacaaaaagggttaccaactgctcagccagaagggcgctcggcttgatccccatgcc
atagactggaaggggatgagccactttccctatctggtgcgccagccaccggggccagac
aacgccttaggtgtggtcaagttcatgttccccaacaagcaccatgtatttgtccacgac
accaaccaccgggaatatttcgcccgccaggtacgcaccaccagctccggctgcatccgc
ctgcgcaaccccctggacctggccgaacgtctgctggcagggcagggctggacccgtgcc
cgcatccaacaggtaatcgcctcgggcaagaccacacgggtcaatctgaagcaacccatg
cgcatcctgatcgtttacagcaccgcctttgccgatgccaatcgggtccacttcaagcag
gacatctacaaccgcgaccccagggtactgtccgccctgcaaggccccttccgcttccat
cagcgcgacctcaagtccggtgccctggtcaaaccggcgtccatgggggacagcgagata
ggtagcgatgccttagagatcgagcaagagccagccagaccctcagcgggcttcggatca
cccggttttctggaatag
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