KEGG   Magnetovirga frankeli: D5125_02125
Entry
D5125_02125       CDS       T11075                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
mfra  Magnetovirga frankeli
Pathway
mfra00740  Riboflavin metabolism
mfra01100  Metabolic pathways
mfra01110  Biosynthesis of secondary metabolites
mfra01240  Biosynthesis of cofactors
mfra02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mfra00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    D5125_02125 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D5125_02125 (ribD)
Enzymes [BR:mfra01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     D5125_02125 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     D5125_02125 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QFY88373
UniProt: A0A5Q0EG25
LinkDB
Position
complement(3038584..3039693)
AA seq 369 aa
MARAIRLAELGLYTTDPNPRVGCVLVRDGQVVGEGFHRRAGEPHAERLALAQAGEWARGA
TAYVSLEPCSHFGRTPPCADGLIEAGVARVVAAMQDPNPLVAGQGLERLRQAGIQVESGL
LEGQARALNPGFNKRMQQGLPWVRCKLAMSLDGRTAMASGESQWITGPEARQDVQRWRAR
SSAILTGSGTLLADDPSLNVRLSNEQLHQLGPDYPVRQPLRVLLDSHLRTPTSARLLGLP
GETLILYADASTSQAQAQAEALRRAGAVVRQVATSAQGLDLEQSLRLLAQRGINEIWVEA
GATLSGALLQAGLVDELILYMAPKLMGDAARGLLHLPGLERMAQCIPLEYADIRRVGRDL
RFVIPCVPV
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcccgagccatccgcctagcggagctggggctttacactaccgaccccaacccgcgg
gtgggctgtgtgctggtgcgcgacggtcaggtggtgggtgagggctttcaccgccgcgcc
ggcgagccccatgccgagcgtctggctctggcgcaagcgggtgagtgggcgcggggtgcc
accgcctatgtcagcctggagccgtgcagccacttcggccgtaccccgccctgcgccgat
ggcctgatcgaggctggggtggcgcgggtggtagccgccatgcaggaccccaatccgttg
gtggcgggccagggtctggaacgcctgcgtcaggccggcattcaggtcgagtcaggtctg
ctggagggtcaagccagggcgctcaatcccggcttcaacaagcgcatgcagcagggtctg
ccctgggtgcgctgcaagctggccatgagtctggacggacgcaccgccatggccagcggc
gagagccagtggatcaccggccccgaggcgcgccaggatgtgcagcgctggcgagcgcgt
agctcggcaatcctgaccggcagcggcacgctgctggcggatgatccttcgctgaatgtc
cgcctcagtaacgaacaactgcaccagctggggccggattatcctgtacgccaacccctg
cgcgtgctgctggacagccatctgcgcaccccaaccagcgcccgcctgctcggcctgccg
ggtgagaccctgatcctctacgctgatgccagcacatcgcaagcccaggctcaggcggag
gcactgcgcagagcgggagccgtggtgcggcaggtagcaaccagcgctcaggggctggac
ctggaacaatcactgcgtctgctggcacagcgcggcatcaatgagatctgggtcgaggct
ggcgctaccctcagcggtgcgctacttcaagcgggactggtggatgagctaatcctctac
atggcgcccaagctcatgggtgatgccgcccgcgggctgctgcatctgcccggccttgag
cgcatggcgcagtgtatcccgctcgaatatgccgatatacgccgggtgggcagggatttg
cgctttgtaataccatgcgtgcctgtctga

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