Magnetovirga frankeli: D5125_05780
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Entry
D5125_05780 CDS
T11075
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mfra Magnetovirga frankeli
Pathway
mfra00300
Lysine biosynthesis
mfra00470
D-Amino acid metabolism
mfra01100
Metabolic pathways
mfra01110
Biosynthesis of secondary metabolites
mfra01120
Microbial metabolism in diverse environments
mfra01230
Biosynthesis of amino acids
Module
mfra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D5125_05780 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D5125_05780 (lysA)
Enzymes [BR:
mfra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D5125_05780 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QFY89026
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Position
96907..98154
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AA seq
415 aa
AA seq
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MDHFNYRDDRLFAEEIPLADIAERFGTPCYVYSRATLERHWRAFDRALANHPHLICYAVK
ANSNLAVLNVLARLGSGFDIVSVGELERVRVAGGDPAKVVFSGVGKRADEMQRALELGIR
CFNIESEPELELLDQVAADMGLQAPVSIRVNPDVDAQTHPYISTGLRENKFGIDINRARA
VYARAAELSHIQILGIDCHIGSQLTGLTPFIDALERVLTLVAQLREDGIELKHLDLGGGL
GVRYVDEDPPEPADYAAQIGNRLLNLPYEILIEPGRAIAANAGLLLTRVEYLKNAEYKHF
AIVDAAMNDLMRPALYQATQGIIPVDRRRLGEEQVYDVVGPVCETGDFLGKGRRLSLQPG
DLLAVRTSGAYGFSMSSNYNSRPRAAEVMVDGSYSHLVRRRESIEDLYALESVLL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaccacttcaactaccgcgatgatcgcctgtttgccgaagagatccccctggccgat
atcgccgaacgcttcggcaccccctgctacgtctattcccgcgccacactggagcgccac
tggcgggcctttgaccgtgccctggccaatcacccgcatctgatctgctacgcggtcaag
gccaactccaacctggccgtgctcaatgtgctggcacgcctggggtcgggctttgacatc
gtctcggtgggggagctggagcgggtacgggtggccggtggcgatccggccaaggtggtg
ttctccggcgtcggcaagcgcgccgatgagatgcaacgcgccctggagttgggcatccgc
tgcttcaatatcgaatccgagccggaactggagctgctcgatcaagtcgccgccgacatg
ggactgcaagcgcccgtatccatccgcgtcaacccggacgtggatgcccagacccacccc
tacatctccaccggcctgagggaaaacaagttcggcatcgacatcaaccgcgcccgcgcc
gtctatgcccgtgccgccgagctgagtcacattcagatactgggcatagactgccacatc
ggctcccagctcaccggcctgacccccttcatcgatgccctggagcgggtactgaccctg
gtggcgcagctcagggaggacggcatcgagcttaagcacctggacctgggcggcggcctg
ggggtgcgctatgtggatgaagacccgccggagccggccgactacgccgcgcagatcggc
aaccgcctgctcaacctgccctatgaaatactcatcgagccgggccgggccatcgccgcc
aatgccggcctactgctgacccgggtggaatacctgaaaaacgccgagtacaagcacttt
gccatcgtcgatgcggcgatgaacgacctcatgcgcccggccctgtatcaggccacccag
ggcatcatcccggtggaccggcgtcggctgggggaggagcaggtgtatgacgtggtcggc
ccggtgtgcgagaccggcgacttcctcggcaagggccgccgcctgagcctgcaaccgggc
gacctgctggcggtgcgcaccagcggtgcctacggcttcagcatgagttccaactacaac
tcgcgcccccgcgccgccgaggtcatggtggacggcagctacagccacctggtacgccgc
cgcgagagcatcgaggacctctacgccctggagtcggtgttgttgtga
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