KEGG   Magnetovirga frankeli: D5125_06245
Entry
D5125_06245       CDS       T11075                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mfra  Magnetovirga frankeli
Brite
KEGG Orthology (KO) [BR:mfra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mfra02048]
    D5125_06245 (cas3)
Enzymes [BR:mfra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D5125_06245 (cas3)
Prokaryotic defense system [BR:mfra02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    D5125_06245 (cas3)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Helicase_C AAA_22 ResIII NET2A_C
Other DBs
NCBI-ProteinID: QFY89108
LinkDB
Position
complement(203394..206048)
AA seq 884 aa
MPYHCLDVAACGERLLMRQAGFRRSFSRLTGMGEEALVTWLRFFLALHDIGKFSSAFQGL
RTDLMPSGCIKNAPYNPRHDSLGFLLWQEKLSESLWKRDLFGLADAGDEDEWFDLLDHWA
RAVTGHHGQPPKDAKFSLSRYFAPADLEAAEAFFLDVAALFLSDNPSTDYPPPGQWLGPT
AEFSWWLAGFAVLADWLGSNQDFFPFCGEPMPLERYWQEIALPNADRAIEQAGLLPGMTA
GRQGLSELFDGFVTPTPLQAFCERLEPGGEPELLILEDVTGAGKTEAAFLLLNRLLAVGA
GQGAYLAVPTMATANAMYGRTGKVYRRLFEGETEPSLVLAHGSRQLHDGFRRSLLSESAG
GDAYEKGEANAQAHCNAWIADNRKRALLAQIGVGTIDQALLAVLTSRHQSLRLLGLLGKV
LVVDEVHAADDYMLGLLRRLLRIHARAGGSAILLSATLPQRMRRELAKAFREGLDAPTAE
LDSTDYPLVTRIRLDGVDEEKVDTRQSVKRNLRFTSLRAFEQVIDWIVAQSEAGQCIAWV
RNTVGDAIEAFETLLKRLPAERLDLFHARFALSDRLAIEDRVLETFGKASTGNGRKGRVL
IATQVIEQSLDLDFDQMVSDLAPIDLLIQRAGRLRRHCRSLDGDPVEGPDQRGESCLHLL
APDPNDNPDEKWYARLFPNGAYVYPNHARLWLTANLLEDKQALAIPEELRMAVEAVYSDD
ADADLPTELLENYWEADGEARAQASLAQANTIDFEQGYRYPGSDWWEDTHTPTRLGDRTI
TLRLARWDGERLRPWSEQQENAWSLSEVNIRHKLAAQEAPAASTEQAEARKNLKENWPRK
GEGYLLIPLTEDNEAWTGEAINERGDTVTIRYTRRHGLTIEKTA
NT seq 2655 nt   +upstreamnt  +downstreamnt
ttgccctatcactgcctagatgttgccgcttgcggtgaaagattgttgatgaggcaagct
ggcttcaggcgctccttcagtcgattgacaggcatgggtgaggaagccttagtgacctgg
ctccgtttttttctcgccctacatgatattggcaaattctccagcgccttccaggggctg
cgtaccgatttaatgccatcaggatgtatcaaaaatgcaccctataaccctcgtcatgac
tccctgggtttcttgttgtggcaggaaaagctttccgaatcgttgtggaagcgggatctt
ttcggtttggccgatgctggggacgaagatgagtggttcgatctgctggatcattgggcg
cgggcggtcaccggccaccatggtcagccgcccaaggatgcgaagttcagcctgagccga
tatttcgctcccgccgatttggaagcggcggaggccttcttcctcgacgtggccgcactg
ttcctttcggacaacccgagcacggactaccctccgcccggccaatggttgggacccacc
gccgaattctcctggtggctcgccggcttcgcggtgctcgccgactggctcggctccaat
caggattttttccccttttgcggcgagcccatgcccctggagcgctattggcaagagatt
gccttgcccaatgccgaccgggccatcgaacaggccggtctgctgccgggcatgaccgct
ggtcgtcagggtctctcggagctatttgatgggttcgttacgcccacaccgctccaggcc
ttctgcgaacgactcgaacccggcggcgagcccgaactgctgatcctggaggatgtcacc
ggcgcgggcaagaccgaggccgccttcctgctgctcaatcgcctgctggcggtcggcgcg
ggacagggtgcctatctggccgtgcccaccatggccaccgccaacgccatgtatggccgc
accggcaaggtctaccgccgcctgttcgagggcgagaccgaaccctccctggtgcttgcc
cacggcagccgccagctgcatgacggctttcgccgctccctgctatccgagtccgccggc
ggcgatgcctatgaaaagggcgaggccaatgcccaggcccactgcaacgcctggatcgcc
gacaaccgcaagcgcgccctgctcgcccagatcggcgtaggcaccatcgaccaggccctg
ctcgcggtgctcacctcccgccaccagtccctgcgcctgctcgggttgctgggcaaggtg
ctggtggtggacgaggtccacgccgccgacgactacatgctcgggcttttgcggcgactg
ctgcgcatccacgcccgcgccggcggcagcgccatcctgctctccgccaccctgccgcag
cgcatgcgccgcgaattggccaaggcctttcgggaaggcctggacgcgcccacggcggaa
ctcgattccaccgattaccccctggtcacccgcatccgccttgacggggtggacgaagaa
aaggtggatacacggcaaagcgtaaaacgtaatctccgcttcaccagcctgcgcgcattc
gaacaggtcatcgactggatcgtcgctcaaagcgaggccggccagtgcatcgcctgggtg
cgcaataccgtgggcgacgccatcgaggccttcgaaaccctgttgaaacgcctccccgcc
gaacggctcgacctgtttcatgcccgcttcgccctcagcgaccggctggccatcgaagac
cgggtgctggagaccttcggcaaggcgagcaccggcaacggacgcaagggccgggtgctg
atcgccactcaggtgatcgagcaatccctggacctcgacttcgatcaaatggttagcgac
cttgcccccatcgacctactgatccagcgtgccggccgcctgcgccgccactgccgttcc
ctggatggtgatcccgtcgaaggcccggaccagcgcggcgaatcctgcctgcatctactg
gcccccgaccccaacgacaatccggatgaaaaatggtacgcccgcctcttcccgaacggg
gcctatgtctatcccaaccacgcccggctctggctcaccgccaatctgctggaagacaaa
caggccctcgcgatccccgaagagctgcgcatggcggtggaggcggtctactccgatgat
gccgacgccgatctgccaacggaactgctggaaaactactgggaagccgacggcgaagcc
cgcgcccaggcctccttggcccaagccaataccatcgacttcgaacagggctatcgctac
cctggcagcgactggtgggaagacacccacacacccacccgactcggcgatagaaccatc
actctgcgcctggcgcgctgggacggcgaacggttgcggccctggagtgagcaacaggag
aacgcctggtccctcagcgaagtgaacatccgccacaaactggcggcccaggaggccccg
gcggcatccacggaacaggccgaggcgcgaaagaacctcaaggagaactggccgcgcaag
ggcgagggctacctgctgatccccctcaccgaagacaacgaggcatggaccggcgaagcc
atcaacgaacgcggcgacacggtaacaattcgttacacccgacgccatggcctgacgatc
gaaaaaaccgcgtag

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