KEGG   Magnetovirga frankeli: D5125_06875
Entry
D5125_06875       CDS       T11075                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mfra  Magnetovirga frankeli
Pathway
mfra03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mfra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    D5125_06875 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfra03021]
    D5125_06875 (rpoZ)
   03400 DNA repair and recombination proteins [BR:mfra03400]
    D5125_06875 (rpoZ)
Enzymes [BR:mfra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     D5125_06875 (rpoZ)
Transcription machinery [BR:mfra03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     D5125_06875 (rpoZ)
DNA repair and recombination proteins [BR:mfra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      D5125_06875 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QFY89225
UniProt: A0A5Q0EIW2
LinkDB
Position
complement(356289..356591)
AA seq 100 aa
MARITVEDCLDNVDNRFDLVLLATKRARQIANGVDPLVPPENDKPTVIALREIAEGLITR
QIIVEREAADAAEAAREEAELAAALAVEVEVEVDEMPLEH
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcccgtattaccgttgaagactgcctagacaacgtggacaaccgctttgacctggtc
ctgctggcgaccaagcgcgcccggcagatcgccaatggcgtcgatcccctggtgccgcca
gagaacgacaagcccacggtgattgccctgcgggagatcgccgaagggctgatcacgcgc
cagatcatcgtcgagcgggaggccgccgatgccgccgaggcggcgcgggaagaggccgaa
ctggccgctgccctggcggtggaggtagaggtagaggtcgatgagatgccccttgagcac
tag

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