Magnetovirga frankeli: D5125_07510
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Entry
D5125_07510 CDS
T11075
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mfra Magnetovirga frankeli
Pathway
mfra00730
Thiamine metabolism
mfra01100
Metabolic pathways
mfra01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D5125_07510 (thiC)
Enzymes [BR:
mfra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D5125_07510 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QFY89347
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Position
493943..495799
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AA seq
618 aa
AA seq
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MSAIPEDFVRKTTALSAEVTRPFPKSRRVYVTGSRADLRVPLRQIEQDPTPASFGMEENP
PIWVYDTSGPYTDPEMQIDLLQGLPELRASWIAERDDSEQLSGPSSQFGQARQADSSLAS
LRFEHLRAPRKAKAGRNLSQMHYARQGIITPEMEFVAIRENCRLQEMRADPRYAKLLRQH
AGQGFGARIPEEITPEFVRSEVAAGRAIIPANINHPELEPMIIGRNFRVKINTNIGNSAV
TSSIEEEVEKLVWSCRWGGDTLMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNG
VAEDLTWEIMRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAERITGIVSRGGSIMAKWCLA
HHQENFLYSHFEEICEIMKAYDVAFSLGDGLRPGSLADANDAAQFAELETLGELTQIAWR
HDVQVMIEGPGHVPMQMIQENVTKELSDCHEAPFYTLGPLITDISPGYDHFSSGIGAAQI
GWYGTAMLCYVTPKEHLGLPNKEDVREGIITYRIAAHAADLAKGFPGVQVQDNAMSKARF
EFRWHDQFALGLDPEKAIASHDETLPAEAHKVAHFCSMCGPKFCSMKISQEVREYAEKGM
NEMAQQFKQGGSEIYREL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatccctgaagactttgtccgcaagaccaccgccctgtccgccgaggtcacc
cggccctttcccaaatcccgccgcgtctatgtcactggcagccgggccgacctgcgcgta
cccctgcgccagatcgaacaagaccccaccccggccagcttcggcatggaggaaaacccg
cccatctgggtctatgacacctccggaccctacaccgaccccgagatgcagatcgatctg
ctgcagggcctgccggagctacgcgccagctggattgccgagcgcgacgacagcgagcag
ctatccggccccagctcccaattcggccaggcccgccaggccgactccagcctcgccagc
ctgcgcttcgagcatctgcgcgcaccgcgcaaggccaaagccgggcgcaacctgagccag
atgcactatgcccgtcaggggatcatcaccccggagatggaattcgtcgccatccgcgag
aactgccgcctgcaggagatgcgcgccgacccgcgctacgccaagctgctgcgccaacac
gccggccagggttttggtgcccgaattcccgaagaaatcaccccggagttcgtgcgcagc
gaggtcgccgccgggcgggccatcatccccgccaacatcaaccacccggagctggagccg
atgattatcggccgcaacttccgcgtgaagatcaacaccaacatcggcaactcggcggtc
acctcgtcgattgaagaagaggtggaaaagctggtctggtcctgccgctggggtggcgac
accctgatggacctgtccaccggcaagaacatccacgagacccgcgagtggattctgcgc
aactcgccggtgcccatcggcactgtgcccatctatcaggccctggagaaggtcaacggc
gtcgccgaggatctgacctgggagatcatgcgcgacaccctgatcgagcaggcggagcag
ggggtggactacttcaccatccacgccggggtgctgctgcgctatgtgccactgaccgcc
gagcgcatcaccggcatcgtcagccgcggcggctccatcatggccaagtggtgtctggcc
catcatcaggagaattttctctacagccacttcgaggaaatctgcgagatcatgaaggcc
tacgatgtcgccttcagcctgggcgatggcctgcgccccggctccctggccgatgccaac
gatgccgcccaattcgccgagctggaaaccctgggcgagctgacccagatcgcctggcgg
cacgatgtgcaggtgatgatcgaaggccccggccatgtgcccatgcagatgatccaggaa
aacgttaccaaggagttgagtgactgccatgaggcacccttctacaccctggggccactg
atcaccgacatctcccccggctacgaccacttcagctccggcataggcgcggcgcagatc
ggctggtatggcaccgccatgctctgctacgtcacccccaaggagcacctgggcctgccc
aacaaggaggacgtgcgcgagggcatcatcacctaccgcatagccgcccacgccgccgac
ctggccaagggcttccctggggtgcaggtgcaggacaacgccatgagcaaggcgcgcttc
gagttccgctggcacgatcagttcgctctcggcctggacccggaaaaggccatcgcctcc
cacgacgaaaccctgcccgccgaggcccacaaggtggcgcacttctgctccatgtgcgga
cccaagttctgttccatgaagatctcgcaagaggtgcgcgagtacgccgaaaagggcatg
aacgagatggcacagcagttcaaacagggcggctcggagatctatcgggagttgtag
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