Magnetovirga frankeli: D5125_08255
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Entry
D5125_08255 CDS
T11075
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mfra Magnetovirga frankeli
Pathway
mfra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D5125_08255 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfra03400
]
D5125_08255 (recC)
Enzymes [BR:
mfra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D5125_08255 (recC)
DNA repair and recombination proteins [BR:
mfra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D5125_08255 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QFY89479
UniProt:
A0A5Q0EKK3
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All DBs
Position
645311..648847
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AA seq
1178 aa
AA seq
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MTALTPGFMLLQGNQLELLRDLLVRWVSEQPLAPLEPECLLVQSNGMAQWLKLALAEDPG
CGIAAALDMQLPGRFVWQAYRSVFEDLPSQSPFDKAPLGWRLYGLLGDLPGLAARLPQGQ
CLEPLQGFLQQDDDPRRRYQLAMGLADLFDQYQLYRADWLHDWAEGRDRLRLAKGQLQPL
AAKQLWQPALWRLLREGLAAERQDRQAPWSSASRAEIHQAFVRHCATLGMEDRPAQLPRR
LILFGISSLPRQVLELLQAIAPFTQVMVFSSNPCREYWGDLIEGKELLRREYRRIRQRKL
PRDAERETLHQHGNPLLAAWGKQGRDYLHLLDELDQPERYRDQFTEGRIDLWQDPGEDCL
LHQLQGDILRLDSLPERHQLASLIDPARDRSLEFIIAHSPQREVEILHDQLLDAFEQACR
QGRSLALRDVLVMAPDIDTYAPHIQAVFGRHAARPGASGTAREPRFLPFHISDRGQRRHN
SLIIALERLLQLPESRFAVSELLDLLDTPALRRRYGLNPADLPRLGQWIRGANIRWGLDG
AQRASLDLPDLEQNSWMFGLRRMLLGYAQGDAGAWQGIEPYAEIGGLEAALVGPLYRLLQ
DLAASREQLRQAQTPEAWLNLLQDLLQRFFLSDSTEDDWALNQLELQLERLLEFWLEAGL
ATQTLPLEVVREALLAALDRPSLSQKFLAGAINFATLMPMRAVPFKQIWLLGMNDGDYPR
SHRTADFDLMARDYRPGDRSRREDDRYLFLEALLSARERLVISWVGRDIRDGSLRPPSVL
LGQLRDHIAAGWRLAQDQSEPCSEAARRKQLLAALTTEHPLQPFSRRYFSLAPEGKDTRL
FTYAHEWRRVHTGPERPEQGQSVNALASYRPEGALGLGDLAEFLRRPLPCFYQRRLGVAD
FRIDAAQEDSETFAVQGLEKWSLQDQMLRQVGLELAQAAGQVANKAPAELLACAAQGLRR
AGQLPMPPFASALQRQLGEELQPPLERYLGLLTEYTQALPAQLGELGQAPAKVQLQARLA
DLRANAQGEVIRLVLQASRLYQGDEIKWYQLVRHWPAHLFAQLRQPVTTRLLGPESDIIL
PPLAAEQAETWLLDLLQAWHEAMQHPLPLPCKTAFGWLLQGRPQQTYEGGFRQEGEIQEH
PGYQRLWPDYASLAAEPAFMAYSQRLYGPVVNSVKPDL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcactgaccccgggattcatgctgctgcagggcaaccagctggagctgttgcgt
gatctgctggtgcgctgggtcagtgaacagccgctggccccgctggagcccgagtgtctg
ctggtgcagagcaacggcatggcgcagtggctgaagctggccctggccgaggaccccggc
tgcggcatcgcagcggccctggacatgcagctgcctggacgctttgtgtggcaggcctat
cgctcggtgttcgaggacctgcccagccaatcccccttcgacaaggccccgctgggctgg
cggctgtacggcctgctcggggacctgccggggctggcggcgcgtctgccccagggccaa
tgcctggagccgctacagggctttctgcagcaggacgacgacccgcgtcggcgctatcag
ctggccatggggctggccgatctgttcgatcaatatcagctataccgggccgactggctg
cacgactgggccgaggggcgcgaccggctgcgcctggccaagggccagctacagccactg
gccgccaagcagctctggcaaccggccctttggcgtttgctgcgcgaggggttggccgcc
gagcgccaggatcgacaagccccctggagcagcgccagccgggccgagatccaccaggcc
tttgtgcgccactgcgccactctgggcatggaggaccggccagcacagctgccgcgacgg
ctgatcctgttcggcatctcctccctgccgcgtcaggtgctggagctgctacaggccata
gcccccttcacccaggtgatggtgttcagcagcaacccctgtcgggaatactggggagat
ctgatcgagggcaaggagctgttgcgccgggaatacaggcgtattcgccagcgcaagctg
cccagggatgccgagcgcgagaccctgcaccagcacggcaaccccctgctcgcggcctgg
ggcaagcagggccgggattatctgcacctgctcgatgagctggaccagccggagcgctat
cgcgaccaatttaccgaggggcgcatcgacctctggcaggaccccggcgaggactgcctg
ctgcaccagctacagggcgacatactgcgtcttgactcgctgccggagcggcaccaattg
gcgagcctgatcgaccctgcgcgggatcgcagcctggagttcatcatcgcccacagcccg
cagcgggaggtggagattctgcatgatcaactgctcgatgccttcgagcaggcctgccga
cagggccgatcgctggccctgcgggatgtgctggtgatggcgccggacatagacacctac
gccccgcacatccaggcggtattcggccgccatgccgcgcggccaggggcatcgggcacg
gcgagggagccacgttttctgccctttcatatctctgatcgcggccagcgccgccacaac
agcctgatcatcgccctggagcggctgctgcagctgcccgaatcgcgctttgccgtgagc
gaactgctcgacctgctcgacaccccggccctgcgccgccgttatggcctgaaccccgcc
gatctgccccgtctgggccaatggatacggggggccaacatccgctgggggctggatggg
gcacaacgcgccagcctggatctgccggacctggagcagaacagctggatgtttggtctc
aggcgcatgttgctgggctatgcccagggcgatgccggggcctggcaggggattgagccc
tatgccgagatcggcggcctggaggcggccctggtcggccccctgtatcgcctgctgcaa
gacctggccgccagccgggaacagctgcgccaggcacagacgccagaggcctggctgaat
ctgctacaggatctgctgcagcgctttttcctcagcgacagcaccgaggacgactgggcc
ctgaaccagctggagctgcaactggagcggctgctggagttctggctagaggccgggctg
gcaacccagaccctacccctggaggtggtgcgcgaggccctgctcgccgccctggaccgg
cccagcctgagccagaaattccttgccggggcgataaacttcgccaccctcatgcccatg
cgtgccgtacccttcaaacagatctggctgctcggcatgaacgatggtgactacccacgc
agccaccggacggcggatttcgacctcatggcacgggattaccggccaggggacagatcg
cgccgggaagacgaccgctacctgttccttgaggccctgctctcggcgcgggaacggctg
gtgatcagctgggtggggcgggatatccgcgatggttccctgcggccaccctcggtactg
ctcggccaattgcgtgaccacatagccgccgggtggcggctggctcaggaccaatcggaa
ccctgctccgaggcggcgcggcgcaagcaactgctcgccgccctgaccacggagcaccca
ctacagcccttcagccgccgctatttcagcctcgcccccgagggcaaggatacccgcctg
ttcacctacgcccatgagtggcgccgggtacataccggtcccgaacggcccgagcagggc
caatccgtcaacgccctggccagctaccgcccggaaggggccttgggtctgggcgacctg
gccgaatttctgcgtcggccgctgccctgcttctatcagcgccgtctgggagtggccgat
ttccgcatcgacgcagcccaggaggacagcgagaccttcgctgtgcagggcctggagaaa
tggtcgctgcaggatcaaatgctgcgtcaggtcggcctggagctggcgcaggcagcgggg
caggttgcgaacaaggcccccgccgagctgctggcctgcgccgcacagggcctgcgccgc
gccgggcaactgcccatgccgcccttcgccagtgccctgcaacggcagctgggcgaggag
ttgcagccgcccctggagcggtaccttggcctgctgacggaatacactcaggccctgccc
gcccagctgggtgagctgggccaggcccccgcaaaggtgcagttgcaggcacgcctggcc
gacctgcgcgccaatgcccagggcgaggtgattcggctggtgctgcaggccagccgtctg
taccagggcgacgagatcaagtggtatcagctggtgcggcactggccggcccatctgttt
gcccagctgcgccagccggtaaccactcggctgctgggcccggagagtgacatcattctg
ccgcccctggccgctgaacaggccgagacctggctattggatctgctgcaagcctggcat
gaggccatgcaacaccccctgccgctgccctgcaagaccgcctttggctggctgctgcaa
ggcaggccgcagcagacctacgagggaggcttccggcaggaaggcgagatccaggagcac
cccggctaccaacgcctctggccggactacgccagcctggccgccgagcctgcattcatg
gcctacagccagcgcctgtatggaccggttgttaacagtgtgaagccagacctgtga
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