Magnetovirga frankeli: D5125_12800
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Entry
D5125_12800 CDS
T11075
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mfra Magnetovirga frankeli
Pathway
mfra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D5125_12800 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mfra01007
]
D5125_12800 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfra03016
]
D5125_12800 (aspS)
03029 Mitochondrial biogenesis [BR:
mfra03029
]
D5125_12800 (aspS)
Enzymes [BR:
mfra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
D5125_12800 (aspS)
Amino acid related enzymes [BR:
mfra01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D5125_12800 (aspS)
Transfer RNA biogenesis [BR:
mfra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D5125_12800 (aspS)
Prokaryotic type
Other AARSs
D5125_12800 (aspS)
Mitochondrial biogenesis [BR:
mfra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
D5125_12800 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QFY90292
LinkDB
All DBs
Position
1621655..1623445
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AA seq
596 aa
AA seq
DB search
MRSHYCGEINASHLDETVELCGWVNRRRDHGGVIFIDLRDRTSLVQVVYDPDLPEVFASA
EQVRNEFVLRIKGRVRRRPEGTENPDLASGEIEILGKELEILNRADTPPFQLDEDDINEE
LRLRHRYIDLRRPLMQQRILLRAQVTRLLRRFLDDNGFLDIETPMLTRATPEGARDYLVP
SRTHAGKFFALPQSPQLFKQLLMMSGMDRYYQITRCFRDEDLRADRQPEFTQLDIETSFM
DEQQITELMERMIRGLFKEVLAIDLPDPFPRMTYHDAMHRYGSDRPDLRTDLELVDVGDL
LAGVEFKVFSGPANDPHGRVAALRLPKGGELSRKEIDDYTKFVGIYGAKGLAYIKVNDLS
RGVEGLQSPILKFIPDEVVQAIMARTAAADGDLVFFGADKAHIVNESLGALRVKLAEERG
LMHKPWAPLWVVDFPMFEWDEKDQWYALHHPFTAPKEEDLPRLESDPGSVLSRAYDMVIN
GSEVGGGSIRIHRQEIQHKVFGLLGIGDEEAQDKFGFLLNALKYGCPPHGGLAFGLDRLI
MLMSGASSIRDVMAFPKTQTASCPLTSAPSEVSAAQLKELNIRIKLPQREQPPEEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccattattgcggcgaaatcaacgccagccacctcgatgaaaccgttgaactc
tgcggctgggtcaatcgccgccgcgatcatggcggggtgatttttatcgatctgcgcgat
cgtaccagcctggtgcaggtggtctatgacccggacctgccggaggtctttgccagcgcc
gagcaggtgcgtaacgaatttgtgctgcgcatcaagggccgcgtgcgccgccgccccgag
ggcacagagaaccccgacctggccagcggcgagatcgagatcctgggcaaggagctggag
atcctcaaccgcgccgacaccccgccgttccagctggacgaagacgatatcaacgaggag
ctgcgcctgcgtcaccgttacatcgacctgcggcggccgctgatgcagcagcgcatcctg
ctgcgcgcccaggtcacccggctgctgcgtcggttcctggatgacaacggctttctcgat
atcgaaacccccatgctcacccgcgccacccccgagggcgcgcgggactatctggtgccc
agccgtacccatgcgggcaagttcttcgccctgccgcagtcgccgcagctgttcaagcag
ctgctgatgatgtcgggcatggatcgttactaccagatcacccgctgtttccgcgatgaa
gacctgcgcgccgaccgccagccggagttcacccagctggatatagagacctccttcatg
gacgagcagcagatcaccgagctgatggagcggatgatccgcggtctgttcaaggaggta
ctggcaatcgacctgcccgatcccttcccgcgcatgacctatcacgacgccatgcaccgt
tatggctcggatcggcccgacctgcgcaccgatctggaactggtggatgtgggcgatctg
ctggccggggtcgagttcaaggtcttctccggcccggccaatgacccccatggccgcgtc
gccgccctgcgcctgcccaagggcggcgagctgagccgcaaggagatcgacgactacacc
aaatttgtcggcatctacggggccaagggcctggcctatatcaaggtcaatgacctgagc
cggggggtcgagggcctgcaatcgcccatcctcaagttcatccccgatgaggtggtacag
gcgatcatggccagaaccgccgccgccgatggcgatctggtgttcttcggtgccgataag
gcgcacattgtcaatgaatccctgggtgccctgcgggtcaagctggccgaggagcgcggc
ctgatgcacaagccctgggcaccgctctgggtggtcgattttcccatgttcgaatgggac
gagaaggaccagtggtatgccctgcatcaccccttcaccgcgcccaaggaggaagacctg
ccgcgcctggagagcgaccccggctcggtgctctcccgcgcctatgacatggtgatcaac
ggcagcgaggtgggcggcggctccatccgtatccaccgccaggagattcagcacaaggtg
tttggcctgctagggatcggcgatgaagaggcgcaggacaagttcggtttcctgctcaat
gccctcaaatacggttgcccgccccacggcggcctggccttcggcctggaccggctgatc
atgctcatgtccggtgccagctcgatccgtgatgtcatggccttccccaagacccaaacc
gccagctgcccgctcacctcggccccttcggaggtcagcgccgcccagctcaaggagctc
aacatccgcatcaagctgccccagcgcgagcagcccccagaggagggttga
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