Magnetovirga frankeli: D5125_15885
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Entry
D5125_15885 CDS
T11075
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mfra Magnetovirga frankeli
Pathway
mfra00521
Streptomycin biosynthesis
mfra00523
Polyketide sugar unit biosynthesis
mfra00525
Acarbose and validamycin biosynthesis
mfra00541
Biosynthesis of various nucleotide sugars
mfra01100
Metabolic pathways
mfra01110
Biosynthesis of secondary metabolites
mfra01250
Biosynthesis of nucleotide sugars
Module
mfra_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mfra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D5125_15885 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D5125_15885 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D5125_15885 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D5125_15885 (rfbB)
00525 Acarbose and validamycin biosynthesis
D5125_15885 (rfbB)
Enzymes [BR:
mfra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D5125_15885 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QFY90819
UniProt:
A0A5Q0EPB5
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Position
2343302..2344357
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AA seq
351 aa
AA seq
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MTILVTGGAGFIGANFVLDWLAQSDEPIVNLDKLTYAGNRQNLAGLEGDGRHRFIQGDIG
EVAVELLRRHEIRAVVNFAAESHVDRSIHGPEDFIQTNILGSFRLLESVRGYWNELRGTA
RDQFRFLHVSTDEVYGSLGPGDPPFAEDHAYRPNSPYSASKAASDHLVRAYHHTYGLPVL
TTNCSNNYGPFQFPEKLIPLVIHHALQGKDLPIYGDGQQIRDWLYVSDHCSAIRRVLEAG
RPGQVYNIGGLNEKANLDIVQLLCDLLDEQRPRADGRPYREQIRFVTDRAGHDRRYAIDA
RKIETELNWRPAETFDTGIRKTLSWYLQHQDWVANVTSGAYRDWLSQQYQG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgactatcctggttaccggcggcgctggcttcatcggcgccaatttcgtcctcgactgg
ctggcgcagagcgacgagcccatcgtcaatctcgacaagctgacctatgccggcaaccgg
cagaacctggcggggctggagggcgatgggcggcatagattcatccagggcgatatcggt
gaggtcgcggtggagctgctgcgccggcatgagattcgcgctgtggtcaactttgccgcc
gaatcccatgtggatcgctccatccacggcccggaggacttcatccagaccaacatcctc
ggcagctttcgcctgctggaatcggtgcgcggctactggaatgaactgcgcggcacggcg
cgggatcagtttcgctttctgcacgtgtccaccgatgaggtctatggctccctggggccg
ggcgatcccccctttgccgaagaccatgcctatcggcccaacagcccctactcggcgagc
aaggcggcctcggatcacctggtgcgcgcctatcaccacacctacggcctgccggtgctg
accaccaattgctccaacaactacgggccctttcagtttccggaaaagctcattcccctg
gtgatccaccacgccctgcagggcaaggatctgccgatttatggcgatggccagcagatt
cgcgactggctctatgtcagcgaccattgcagcgccatccgccgcgtgctggaggccgga
cggccggggcaggtctataacatcggcgggctcaacgagaaggccaacctggacatagtc
cagctgctctgcgacctgctggacgagcaacggccacgcgccgatggccgcccctatcgt
gagcagatccgctttgtcaccgaccgcgccggccatgaccgccgctacgccatagacgca
cgcaagatcgagaccgagctgaactggcggccggcagagaccttcgataccggcatccgc
aaaaccctgagctggtacctgcagcatcaggactgggtggctaatgtcaccagcggcgct
tatcgggattggctgagccagcagtatcagggttag
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