KEGG   Magnetovirga frankeli: D5125_15885
Entry
D5125_15885       CDS       T11075                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mfra  Magnetovirga frankeli
Pathway
mfra00521  Streptomycin biosynthesis
mfra00523  Polyketide sugar unit biosynthesis
mfra00525  Acarbose and validamycin biosynthesis
mfra00541  Biosynthesis of various nucleotide sugars
mfra01100  Metabolic pathways
mfra01110  Biosynthesis of secondary metabolites
mfra01250  Biosynthesis of nucleotide sugars
Module
mfra_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:mfra00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    D5125_15885 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    D5125_15885 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    D5125_15885 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    D5125_15885 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    D5125_15885 (rfbB)
Enzymes [BR:mfra01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     D5125_15885 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 3Beta_HSD
Other DBs
NCBI-ProteinID: QFY90819
UniProt: A0A5Q0EPB5
LinkDB
Position
2343302..2344357
AA seq 351 aa
MTILVTGGAGFIGANFVLDWLAQSDEPIVNLDKLTYAGNRQNLAGLEGDGRHRFIQGDIG
EVAVELLRRHEIRAVVNFAAESHVDRSIHGPEDFIQTNILGSFRLLESVRGYWNELRGTA
RDQFRFLHVSTDEVYGSLGPGDPPFAEDHAYRPNSPYSASKAASDHLVRAYHHTYGLPVL
TTNCSNNYGPFQFPEKLIPLVIHHALQGKDLPIYGDGQQIRDWLYVSDHCSAIRRVLEAG
RPGQVYNIGGLNEKANLDIVQLLCDLLDEQRPRADGRPYREQIRFVTDRAGHDRRYAIDA
RKIETELNWRPAETFDTGIRKTLSWYLQHQDWVANVTSGAYRDWLSQQYQG
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgactatcctggttaccggcggcgctggcttcatcggcgccaatttcgtcctcgactgg
ctggcgcagagcgacgagcccatcgtcaatctcgacaagctgacctatgccggcaaccgg
cagaacctggcggggctggagggcgatgggcggcatagattcatccagggcgatatcggt
gaggtcgcggtggagctgctgcgccggcatgagattcgcgctgtggtcaactttgccgcc
gaatcccatgtggatcgctccatccacggcccggaggacttcatccagaccaacatcctc
ggcagctttcgcctgctggaatcggtgcgcggctactggaatgaactgcgcggcacggcg
cgggatcagtttcgctttctgcacgtgtccaccgatgaggtctatggctccctggggccg
ggcgatcccccctttgccgaagaccatgcctatcggcccaacagcccctactcggcgagc
aaggcggcctcggatcacctggtgcgcgcctatcaccacacctacggcctgccggtgctg
accaccaattgctccaacaactacgggccctttcagtttccggaaaagctcattcccctg
gtgatccaccacgccctgcagggcaaggatctgccgatttatggcgatggccagcagatt
cgcgactggctctatgtcagcgaccattgcagcgccatccgccgcgtgctggaggccgga
cggccggggcaggtctataacatcggcgggctcaacgagaaggccaacctggacatagtc
cagctgctctgcgacctgctggacgagcaacggccacgcgccgatggccgcccctatcgt
gagcagatccgctttgtcaccgaccgcgccggccatgaccgccgctacgccatagacgca
cgcaagatcgagaccgagctgaactggcggccggcagagaccttcgataccggcatccgc
aaaaccctgagctggtacctgcagcatcaggactgggtggctaatgtcaccagcggcgct
tatcgggattggctgagccagcagtatcagggttag

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