Mycolicibacterium frederiksbergense: EXE63_04065
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Entry
EXE63_04065 CDS
T10436
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mfre Mycolicibacterium frederiksbergense
Brite
KEGG Orthology (KO) [BR:
mfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfre03032
]
EXE63_04065
03036 Chromosome and associated proteins [BR:
mfre03036
]
EXE63_04065
03400 DNA repair and recombination proteins [BR:
mfre03400
]
EXE63_04065
DNA replication proteins [BR:
mfre03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EXE63_04065
Chromosome and associated proteins [BR:
mfre03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EXE63_04065
DNA repair and recombination proteins [BR:
mfre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EXE63_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QIV80175
UniProt:
A0A6H0S1I0
LinkDB
All DBs
Position
complement(198778..199425)
Genome browser
AA seq
215 aa
AA seq
DB search
MNKAELIDALTTKLGTDRRQATAAVENIVDTIVRAVHKGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPADGPAVKRGVAAAPAKRTAAKKAA
PAKKAAVKKAAPAKKAPAAKKAAPAKKAVVKKAAPAAKKAAPAKKAPAKKAPAAKKAAPA
KKAPAKKAAPAKKVVAKAPAKKAPAKKAPAKRGRK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcatcgacgcactcacaaccaagttgggcaccgatcgtcgacag
gctactgccgcggttgagaacatcgtcgacacgatcgttcgtgcggtgcacaagggtgag
agcgttaccatcactggcttcggcgttttcgagcagcgtcgccgtgccgcccgtgtggcc
cgcaacccgcgcaccggcgagaccgtcaaggtcaagccgacgtcggttccggccttccgc
ccgggcgcgcagttcaaggcagttgtctctggcgcgcagcgtctcccggcagacggcccc
gccgtcaagcgtggtgtggcagcggctccggccaagcgcaccgccgccaagaaggccgca
ccggccaagaaggcggcagtgaagaaggccgcaccggccaagaaggctcccgccgccaag
aaggctgctccggccaagaaggctgtggtcaagaaggccgcaccggcagcgaagaaggct
gctccggccaagaaggctccggccaagaaggctcccgccgccaagaaggctgctccggcc
aagaaggctccggccaagaaggccgcaccggccaagaaggtcgtcgccaaggcccccgcc
aagaaggctccggccaagaaggctccggccaagcgcggccgcaagtaa
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