Mycolicibacterium frederiksbergense: EXE63_09660
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Entry
EXE63_09660 CDS
T10436
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mfre Mycolicibacterium frederiksbergense
Pathway
mfre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EXE63_09660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfre03021
]
EXE63_09660
03400 DNA repair and recombination proteins [BR:
mfre03400
]
EXE63_09660
Enzymes [BR:
mfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EXE63_09660
Transcription machinery [BR:
mfre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EXE63_09660
DNA repair and recombination proteins [BR:
mfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EXE63_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIV81128
UniProt:
A0A6H0S185
LinkDB
All DBs
Position
complement(1373183..1376677)
Genome browser
AA seq
1164 aa
AA seq
DB search
MEGCILAVSSQSKSDSTNSSVPGAPNRISFAKLREPLEVPGLLDVQTDSFEWLVGSDRWR
TKAVDRGDVNPVGGLEEVLAELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAA
PLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDSSI
DKATEKDLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQITER
FGFSEIMMGTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARV
GRYKVNKKLGLNAGQPITNSTLTEEDVVATIEYLVRLHEGQTSMTAPGGVEVPVEVDDID
HFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFF
GTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEG
PNIGLIGSLSVYARVNPFGFIETPYRKVVDGQVTDQIDYLTADEEDRHIVAQANSPLDGD
GRFTDEKILVRRKGGEVEFVSAIDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANM
QRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKTGVIEEVSADYITVMADDGSRQTYR
MRKFARSNHGTCANQRPIVDTGQRVEAGQVLADGPCTENGEMALGKNLLVAVMPWEGHNY
EDAIILSSRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIIR
IGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIR
VFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPIEDMPFMPDGT
PVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIEGSPEWAGKLPEGMLSAPADSIVAT
PVFDGAQEGELEGLLGSTLPNRDGDVMVNAQGKAELFDGRSGEPFPYPVTVGYMYILKLH
HLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSD
DTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDED
LERAAANLGINLSRNESASVEDLA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ctggaagggtgcatcttggcagtctcgagccagagcaagtcagattccactaatagctcc
gttccgggagcgccgaaccgaatttccttcgccaagctccgtgagcctctcgaggttccg
gggctccttgacgttcagaccgactctttcgagtggctggtcggttcggaccggtggcgg
acgaaggcggtcgaccgcggcgacgtgaacccggtcggaggcttggaggaagtactcgcc
gaactgtctccgatcgaggatttctccggctcgatgtcgctgagcttctcggacccgcgc
ttcgacgaagtcaaggcgccggtggacgagtgcaaagacaaggacatgacgtacgcggcc
ccgctgttcgtcacggccgagttcatcaacaacaacaccggtgagatcaagagccagacg
gtcttcatgggtgacttcccgatgatgaccgagaagggcaccttcatcatcaacggcacc
gagcgtgtcgtggtgtcccagttggtccgttcgccgggcgtgtacttcgattcgtcgatc
gacaaggccaccgagaaggacctgcacagcgtcaaggtcatcccgggccgcggtgcgtgg
ctggagttcgacgtcgacaagcgcgacaccgtcggcgtccgcatcgaccgcaagcgccgc
cagccggtcaccgtgctgctgaaggcgctcggctggaccaacgagcagatcaccgagcgc
ttcggcttctccgagatcatgatgggcacgctggagaaggacaacaccgccggaaccgat
gaggcgctgctggacatctaccggaagctgcgcccgggcgagccgccgaccaaggagtcc
gcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctggctcgcgtc
ggccgctacaaggtcaacaagaagctgggcctgaacgccggccagccgatcaccaactcg
acgctgaccgaagaggacgtcgtcgcgacgatcgagtacctggtgcgtctgcacgagggc
cagacctcgatgaccgcccccggtggcgtcgaggtgcccgtcgaggtcgacgacatcgac
cacttcggcaaccgtcgtctgcgtaccgtgggcgagctgatccagaaccagatccgggtc
ggcctgtcgcgcatggagcgtgtcgtgcgtgagcgcatgacgacccaggacgtcgaggcg
atcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttc
ggcaccagccagctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacccac
aagcgccgcctgtcggcgctgggccccggcggtctgtcccgtgagcgtgccggcctcgag
gtccgcgacgtgcactccagccactacggccggatgtgcccgatcgagacccccgagggc
ccgaacatcggcctgatcggttcgctgtcggtgtacgcacgggtcaacccgttcggtttc
atcgagacgccgtaccgcaaggtggtcgacggccaggtcaccgaccagatcgactacctg
accgccgacgaggaggaccgccacatcgtggcgcaggccaactcgccgctggatggcgac
ggccggttcaccgacgagaagatcctggtccgccgtaagggcggcgaggtcgagttcgtc
tccgccatcgacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgacg
gcgatgatcccgttcctcgagcacgacgacgccaaccgtgccctgatgggtgccaacatg
cagcgccaggcggttccgctggtccgcagcgaggccccgttggtcggtaccggtatggag
ttgcgtgccgccatcgatgccggtgacgtggttgtcgccgacaagaccggtgtgatcgaa
gaggtttcggccgactacatcaccgtgatggccgacgacggctcgcgccagacctaccgg
atgcgcaagttcgcccggtccaaccacggcacgtgcgccaaccagcgcccgatcgtggac
accggacagcgtgtcgaggccggccaggtgctggccgatggtccgtgcaccgagaacggt
gagatggcgctgggcaagaacctgctcgtcgccgtcatgccgtgggagggtcacaactac
gaagacgcgatcatcctgtccagccgtctggtcgaagaggacgtgctcacctcgattcac
atcgaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatcacccgg
gacatcccgaacgtctccgatgaggtgctggccgatctcgacgagcgcggcatcatccgc
atcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcaccccgaagggcgag
accgagctgaccccggaggagcgcctgctgcgtgccatcttcggtgagaaggcccgcgag
gtccgcgacacgtcgctcaaggtgccccacggcgagtccggcaaggtcatcggcatccgc
gtgttctcccgcgaggatgacgacgagctgcccgccggcgtcaacgaactggtccgcgtc
tacgtggcccagaagcgcaagatctccgacggcgacaagctcgccggacgccacggcaac
aagggcgtcatcggcaagatcctgccgatcgaggacatgccgttcatgcccgatggcacc
ccggtggacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggccagatc
ctggagacccacctcgggtgggtggccaaggcgggctggaacatcgagggctcacccgaa
tgggcgggcaagctgcccgagggcatgttgtcggctccggccgacagcatcgtggccacc
ccggtgttcgacggtgcccaggaaggggagctggagggcctgctcggctcgacgctgccc
aaccgcgacggcgacgtcatggtcaacgcgcagggcaaggccgagctgttcgacggtcgt
tccggcgagccgttcccgtacccggtgacggtcggctacatgtacatcctgaagctgcac
cacctggtggacgacaagatccacgcccgctcgaccggtccgtactcgatgatcacccag
cagccgctcggtggtaaggcgcagttcggtggtcagcggttcggcgagatggagtgctgg
gccatgcaggcctacggtgcggcctacacgctgcaggagctgctcaccatcaagtccgac
gacacggtgggtcgcgtcaaggtgtacgaggccatcgtcaagggcgagaacatccccgaa
ccgggtatcccggagtcgttcaaggtgcttctcaaggagctgcagtcgctctgcctgaac
gtcgaggtgctgtcttcggacggcgcggcgatcgagatgcgagacggagacgacgaggac
ctggagcgcgctgctgccaacctcggaatcaacctgtcgcgcaacgaatctgcctctgtc
gaagatctcgcttaa
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