Mycolicibacterium frederiksbergense: EXE63_23780
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Entry
EXE63_23780 CDS
T10436
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mfre Mycolicibacterium frederiksbergense
Pathway
mfre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXE63_23780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfre03000
]
EXE63_23780
03400 DNA repair and recombination proteins [BR:
mfre03400
]
EXE63_23780
Enzymes [BR:
mfre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EXE63_23780
Transcription factors [BR:
mfre03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EXE63_23780
DNA repair and recombination proteins [BR:
mfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXE63_23780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
QIV83565
UniProt:
A0A6H0SB74
LinkDB
All DBs
Position
complement(4267791..4269287)
Genome browser
AA seq
498 aa
AA seq
DB search
MHDDFDSCYRAVQSKDARFDGWFVTAVLSTGIYCRPSCPVRPPLARNMEFYPTAAAAQKA
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDRSGVTGLAGRLGYTTRQLERL
LQAEVGANPLALARAQRSQTARVLIETTDLPFSDVAFAAGFSSIRQFNETVRAVSALTPT
ALRQRARSRGGDERVGTDVLSLRLPVRAPFSYEGLFGHLAASAVPGVEEVRDGAYRRTLR
LPSGSGVVALTPHPDHVQCRLVVDDFRDLSAAIARCRRLLDLDADPVAVVDALGQDAHLG
AVVAKAPGQRIPRTVDEAELAVRVVLGQQVSVKAARTHAGRLAQAYGTAVTDPGGGLTHV
FPSTEQLTALDPDRLAMPASRRRTLTTLVAAMAAGDVEVDAGADWNRARAQLTALPGIGP
WTTEVIAMRGFGDPDAFPVTDLGVRAAAKAVGLPAASDALLEHSARWRPWRAYVTQHLWT
ALDHAVNEWPPRSQREKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgatttcgacagttgctaccgggcggtccagtccaaggacgcccgtttcgac
ggctggttcgtcaccgccgtgctcagcaccggcatctattgccggccgagctgccccgtg
cgcccaccgctggcacgcaacatggagttctatccgacggccgccgcagcccagaaggcc
ggtttccgcgcctgcaagcgctgccgcccggacgcctccccaggctccccggagtggaat
gtgcgcggcgatgtggtggctcgggccatgcggctgatcgccgacggcaccgtggaccgg
tccggggtgaccgggttggcgggccgcctgggatacaccacccgccaactggagcggctg
ctgcaggccgaggtgggcgcgaacccgctggcgctggcccgggcgcagcgcagccaaacc
gctcgggtgctcatcgagaccaccgacctcccgttcagcgatgtcgcattcgcggcggga
ttcagcagtatccggcaattcaacgagaccgtccgagcggtcagtgcgttgacgccgacc
gcgctgcggcagcgcgcacgcagccgcggcggcgacgaacgggttggtaccgacgtgctg
tcgctgcgcctgccggtacgcgcaccgttctcctatgaggggctgttcgggcatctcgcc
gccagtgcggtgcccggtgtcgaggaggtgcgtgacggggcctatcggcggacgctgcgc
ctgccctccggttccggggtggtcgcgctgacgccccaccccgaccatgtgcagtgcagg
ctggtcgtcgacgacttccgagatctctccgcggcgatcgcccgctgccggcgcctgctc
gacctggacgcggacccggtcgccgtggtggacgcgctgggccaggacgcccacctcggc
gcggtcgtggccaaggcacccggccagcgcatcccccgcaccgtcgacgaggcggagctg
gcggtccgggtggtgctgggtcagcaggtgtcggtgaaggcggcccgcacgcacgccggg
cgcctcgcgcaggcgtacggcacggcggtcaccgatcccgggggcggcctcacccatgtc
ttcccgtccaccgagcagctgaccgcgctggatccggaccgcttggccatgcccgcctcc
cgacggcgcaccctgaccaccttggtcgccgccatggccgccggcgatgtcgaggtggac
gcgggagcggactggaacagagccagggctcagctcacggcgttgcccgggatcggcccg
tggaccaccgaagtcattgcgatgcgcgggttcggcgacccggacgcattcccggtgacc
gatctgggcgtacgagcggccgccaaggccgtcggcctacctgccgcctcagatgccctg
ctggaacacagcgcccggtggcgcccctggcgggcctatgtgacacaacatctgtggaca
gcactcgaccatgccgtcaacgaatggccaccacgatcgcagcgggagaaatcatga
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