Mycolicibacterium frederiksbergense: EXE63_25365
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Entry
EXE63_25365 CDS
T10436
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mfre Mycolicibacterium frederiksbergense
Pathway
mfre03018
RNA degradation
Brite
Enzymes [BR:
mfre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EXE63_25365
Messenger RNA biogenesis [BR:
mfre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EXE63_25365
Ribosome biogenesis [BR:
mfre03009
]
Prokaryotic type
rRNA processing factors
EXE63_25365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIV83836
UniProt:
A0A6H0S9J7
LinkDB
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Position
4595389..4598367
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AA seq
992 aa
AA seq
DB search
MAEDAPTQDLSENTQIEELPAKLRVHSLARVLGTTSKRIVDALAELDGRARSPHSTVERA
QAEQVREVLNAEAAAAAAEVPVAETPADAPAAEAPAPEAPATVPEPAAVVEEPESRLLLE
APPVPDAVTEDGEKSTEPAPYLPLFVAPQPVTALKSRPAPAAEVTEDADDDTDEADGDDA
GDDDQSERPAARRRRRGRRGRGRGRGEQSAEDGDDTGDDETDGADHAGADDADGEDTDGE
DADSEDNDSDDDGGEDGAGSEAGSRRRRRRRRRKSGGADSDEPVAPDDPPNTVVHERAPR
AKSAKAGRDPDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERTMI
VRDKIRTEPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAF
VDIGRGRNGVLYAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQV
SLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPAGAGVIIRTASEGVKEDDIRS
DVNRLQERWSQIEANAAEVTKKKAGAAIALYEEPDVLVKVIRDLFNEDFSGLIVSGDDAW
NTISNYVSSVAPELVPRMTKYEPSAPDGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVID
RTEAMTVVDVNTGKFTGSGGNLEQTVTKNNLEAAEETVRQLRLRDIGGIIVIDFIDMVLE
SNRDLVLRRLTEALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTCTHCAGRGIH
LHADPVDSAGPSGGGGGRKSEPGSGNSRRSKRGKKAAKPEEVADDIQMAKVPAHAAGEHP
MFKAMAAGVHGPDDDAPVDVDDDTGDSDEPTVDGAETEEPAIGAGLGETADDSEDDDTDD
DSDDDDSDDDDSDDDDSDDDESDEDDLDLDDDDDEEDDDEIEVLDDEDDDDDSDEDDDSE
DDESAAYEPPVAAPRGRVRRRAAARPAGPPAG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagacgcccctacccaagacctgtccgagaacacccagatcgaagaactgccg
gcgaagctgagagttcactcgctggcccgcgtgctgggcaccaccagtaagcgcattgtc
gatgcactcgccgagctggacggccgggcccgcagcccgcactcgaccgtcgagcgagcc
caggccgaacaggtccgcgaggtcctcaacgccgaagccgccgcagccgcggccgaggtc
ccggtcgccgagaccccggctgacgcccccgccgccgaggcgcccgcccctgaggcaccg
gccaccgtgccggagcccgccgcggtcgtcgaagagcccgaatcccgcctgctgctggag
gccccgccggtccccgacgcggtgaccgaggacggcgaaaaatccaccgaaccggcgccc
tatctgccgctgttcgtggccccgcagccggtgacggcgctcaagtcgcgtcctgcgccc
gctgccgaggtcaccgaggacgccgacgacgacaccgatgaagccgacggcgacgacgcc
ggtgacgatgaccagtccgagcggcccgccgcccggcggcgccgtcggggccgccgcggc
cgtggccgcggacgcggtgagcagagcgccgaggacggcgacgacaccggtgacgacgag
accgatggcgccgatcatgccggcgccgacgacgccgatggcgaggacaccgacggcgag
gacgccgactcggaggacaacgattccgacgatgacggcggtgaggacggagcgggctcg
gaggcgggcagccgtcgccgtcgccgtcgccggcgtcgcaagtcgggtggggcagattcc
gacgaacccgtcgcacctgacgatccgcccaacacggtcgtgcacgagcgcgctccccgg
gcgaagtcggcgaaggccggccgcgaccccgacgagatccagggcatctccgggtccacc
cgactggaggccaagcgccagcgccgccgcgacggccgcgacgccgggcgtcggcgtccg
ccgatcctgagcgaggccgagttcctggcccgccgcgaagccgtcgagcgcaccatgatc
gtgcgcgacaagatccgcaccgaaccgccgcacgagggcgcccgctacacccagatcgcg
gtcctcgaggacggcgtcgtggtcgagcacttcgtcacctcggcggcctcggcatcgctg
gtcggcaacatctacctcggcatcgtgcagaacgtgctgccttcgatggaggcggcgttc
gtcgatatcggccgcggccgcaacggcgtcctctacgccggcgaggtcaactgggaggcc
gccggtctcggcggtgcccagcgcaagatcgaacaggccctcaagcccggcgactatgtc
gtcgtccaggtcagcaaggacccggtcggtcacaagggagcccggctcaccacgcaggtc
tcgttggccggtcgctacctggtgtatgtgccgggtgcgtcgtccaccggtatcagccgc
aagctgcccgacaccgaacggcagcgcctcaaggagatcctgcgcgaggtcgtcccggcc
ggtgccggcgtgatcatccgcaccgcgtcggagggcgtcaaggaagacgacatccgttcc
gacgtgaaccggttgcaggagcgctggtcgcagatcgaggccaacgccgccgaggtcacc
aagaagaaggccggcgccgcgatcgcgctctacgaagagcccgatgtcctggtgaaggtc
atccgtgacctgttcaacgaggacttctccggcctcatcgtgtccggtgacgatgcctgg
aacaccatcagcaactacgtcagttccgttgccccggagctggttccgcggatgacgaag
tatgagcccagcgcgccggacggccccgacgtgttcgcggtgcaccgcatcgacgagcag
ctggccaaggcgatggaccgcaaggtgtggctgccctcgggcggcaccctggtcatcgat
cgcaccgaggcgatgacggtcgtcgacgtcaacaccggcaagttcaccgggtcgggcggc
aacctcgagcagacggtcaccaagaacaatctcgaggccgccgaggagacggtgcgccag
ctgcggctgcgcgatatcggcgggatcatcgtcatcgacttcatcgacatggtgctggag
tccaaccgcgacctggtgctgcgccggctgaccgaggcgctggcgcgggaccgcacccgc
catcaggtgtcggaggtgacctcactcggcctggtgcagctgacccgtaagaagctcggc
accggcctgatcgaggcgttctccacgacctgcacgcactgcgcgggccgcggcatccat
ctgcacgccgatccggtggactcggcggggccgtccgggggcggcggcgggcgcaagtcc
gagcctggctccggcaacagccgccgcagcaagcggggcaagaaggcggccaagcccgaa
gaggtcgccgacgacatccagatggcgaaggtgccggcccacgcggccggtgagcacccg
atgttcaaggcgatggcggccggcgtgcacggaccggacgacgacgcccccgtcgacgtc
gacgatgacaccggcgactccgacgagccgaccgttgacggtgccgagaccgaggaaccg
gccatcggtgccggcctcggggagaccgccgacgactcggaggacgacgacactgacgac
gactcggacgatgacgattcggacgatgacgattcggacgatgacgattcggacgatgac
gagtccgatgaggacgatctcgacctcgacgacgacgatgacgaagaggacgacgacgag
atcgaggttctcgacgacgaggacgacgatgacgactccgatgaggatgacgactccgag
gacgacgaatcggcggcatacgagcccccggtcgcggcccccaggggtcgggtccgcagg
cgggcggcggcccgaccggcaggcccaccggccggctag
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