Mycolicibacterium frederiksbergense: EXE63_26830
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Entry
EXE63_26830 CDS
T10436
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mfre Mycolicibacterium frederiksbergense
Pathway
mfre03030
DNA replication
mfre03430
Mismatch repair
mfre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXE63_26830
03430 Mismatch repair
EXE63_26830
03440 Homologous recombination
EXE63_26830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfre03032
]
EXE63_26830
03400 DNA repair and recombination proteins [BR:
mfre03400
]
EXE63_26830
Enzymes [BR:
mfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXE63_26830
DNA replication proteins [BR:
mfre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXE63_26830
DNA repair and recombination proteins [BR:
mfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXE63_26830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
QIV84096
UniProt:
A0A6H0SAB5
LinkDB
All DBs
Position
complement(4914152..4915945)
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AA seq
597 aa
AA seq
DB search
MQQLSFADVDPMADLLLADTTFVVVDLETTGGRATASTPGGDDHDAITEIGAVKIRGGEV
LGELATLVDPGRSIPPQIVSLTGITSAMVHDAPRIDAVLPAFLEFSRGAVLVAHNAGFDI
GFLRAAAQRLGITWPRPPVLCTVRLARRVLTRDEAPSVKLSALARLFSATTTPNHRALDD
ARATVDVLHGLIERVGNQGVRTYPELRAYLPDATAPQRRKRHLADGVPSRPGVYLFRGPA
DEVLYIGTAVNLRRRVGQYFTGADPRTRMKEMVALATRVDHVECAHELEAGVRELRLLAA
HAPPYNRRSKFPRRWWWITLTEEAFPRFSVVRSPRSPRAIGPFTSRADAVTTVDVLARGT
GVRTCSTRLARSARHACEERELSGCPATRGADMAQYAGAAQRAADLLDGVDSAAFGTVLS
QIEALASLHRYETAARLRDHAAAAVETTWRGQRLQALAAVDELIAARPDGLGGWELAVIR
HGQLASAGCARRGVPPMPVVDAITLAAQSILPQTAPLGGALVEETALITRWLAGPGVRVV
SCPSGYASPIGSAARWSDWAATARSARLAAAQPDTHTDDLDDRYGVHKPRRAHARAV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagctcagctttgccgatgtggatccgatggccgatctgctgctggccgacacc
accttcgtggtggtggacctggagaccaccggcggccgcgccaccgccagcactcccggc
ggcgacgaccatgatgcaatcaccgagatcggcgcggtcaagatccgcggcggtgaggtg
ctcggcgaactggccaccctcgtcgatccgggccgcagcattccgccgcagatcgtctcg
ctgaccggcatcacctcggcgatggtccatgacgcaccgcgcatcgacgccgtgctgccc
gcgttcctggagttctcccggggcgcggtgctggtcgcccacaatgcgggattcgacatc
gggttcctgcgggccgcggcgcagcgactgggcatcacctggccgcgcccaccggtgctg
tgcacggtgcggctggcacggcgggtgctgacccgtgacgaggcgcccagcgtgaagctc
tcggccctggcgcggttgttctcggccaccaccaccccgaaccaccgggcactcgacgac
gcccgcgcgaccgtcgatgtgctgcacgggctcatcgagcgcgtcgggaaccagggggtg
cgcacctatcccgagttgcgcgcctacctgcccgacgccaccgccccgcagcgtcgcaag
cgccacctggccgacggtgtgccgtcccggccgggcgtgtacctgttccgcggacccgcc
gatgaggtgctctacatcggcaccgcggtgaatctgcgccgccgggtcggccagtacttc
accggggccgacccacgcacccggatgaaggagatggtggcgctggccacccgggtcgac
catgtcgagtgtgcgcacgagctggaggccggggtgcgcgaattgcggctgctggccgcg
catgccccgccgtacaaccgccggtccaagttcccgcgccggtggtggtggatcaccctc
accgaggaggcgttcccgcgcttctcggtggtgcggtccccgcgcagtccgcgcgcgatc
ggaccgttcacctcccgcgcggacgccgtcacgaccgtcgacgtgctggcccgcggcacc
ggcgtacgaacctgcagcacgcggctggcccgcagcgcgcgccacgcctgcgaggaacgc
gagctctccggatgcccggcgacccgtggcgccgatatggcccagtacgcgggcgcagcg
cagcgggcggccgatctgctcgacggtgtggacagcgccgcgttcggcaccgtgctgagc
cagatcgaggcgttggcgagcctgcaccgttatgagaccgccgcccggctgcgcgatcac
gccgcggccgccgtggagacgacgtggcgtggtcagcggctccaagcgctggccgcggtc
gacgagctgatcgcggcgcggcccgacgggctcggcggctgggagctggccgtgatccgg
cacggacagctggcctcggccgggtgcgcacgccgcggggtgccgcccatgcccgtcgtc
gacgccataacccttgcggcacagtcgatcctgccgcaaacggccccactcggcggcgcc
ctggtggaggagacggcgttgatcacccggtggctggccgggcccggcgtccgggtggtg
agttgccccagcgggtacgccagcccgatcgggtcggcggcccggtggtccgactgggcc
gccaccgcgcgttcggcgcgcctggccgccgcgcagccagacacccacacagatgatctg
gacgatcggtacggcgtgcacaaaccccggcgcgcccacgccagagctgtctga
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