Mycolicibacterium frederiksbergense: EXE63_30215
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Entry
EXE63_30215 CDS
T10436
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfre Mycolicibacterium frederiksbergense
Pathway
mfre03030
DNA replication
mfre03430
Mismatch repair
mfre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXE63_30215 (dnaE)
03430 Mismatch repair
EXE63_30215 (dnaE)
03440 Homologous recombination
EXE63_30215 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfre03032
]
EXE63_30215 (dnaE)
03400 DNA repair and recombination proteins [BR:
mfre03400
]
EXE63_30215 (dnaE)
Enzymes [BR:
mfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXE63_30215 (dnaE)
DNA replication proteins [BR:
mfre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXE63_30215 (dnaE)
DNA repair and recombination proteins [BR:
mfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXE63_30215 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QIV84680
UniProt:
A0A6H0SBY9
LinkDB
All DBs
Position
complement(5618918..5622454)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSASFVHLHNHTEYSMLDGAAKVKPMVAEAQRLEMPAIGMTDHGNMFGASEFYNVATDAG
IKPIIGIEAYIAPGSRFDTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLS
SMASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHVDEAVAAAAKWQEI
FGKENFFLELMDHGIEIERRVRDGLLEVGRKLGIPPLATNDCHYVTREASHAHEALLCVQ
TGKTLSDPARFKFDGDGYYLKSAADMRALWDSQVPGACDSTLLIGERVQSYADVWAPRDR
MPVFPVPEGHNQETWLRHEVEEGLLRRFPGGATQDYHDRADYEIKVICDKGFPAYFLIVA
DLINYARSVNIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDIDID
FDDRRRGEMVRYASDKWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPKHERYKEAAEVRGLLDTDPDVRTIYETARGLEGLVRNAGVHAC
AVIMSSEPLVDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALENIK
ANRGIDLDMDHLPLEDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKEILAETYGLIVYQEQIMFIAQKVA
GYSMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEAAVKALWDTILPFAGYAFNK
SHAAGYGLVSFWTAYLKANYQAEYMAGLLTSVGDDKDKAAIYLSDCRRLGITVLPPDVNE
SVHNFASVGQDIRYGLGGVRNVGTNVVQSIINARNEKGKYTDFSDYLNKIDIGACNKKVT
ESLVKAGAFDSLGHPRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGGDADSGMESVFTI
PVPEGEWDDKHKLALEREMLGLYVSGHPLDGVAHLLAAQVDTQIPAILEGDIPNDTQVRI
GGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYTAFGADIADDAVVLVGAKVAI
RDDRISLIANDLIVPDFSNAQGDRPVAVSLPTRQCTVDKVTALKQVLARHPGTSQVHLRL
ISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcgttcgtgcacctgcacaaccacaccgaatactcgatgctggacggtgcc
gcgaaggtcaaaccgatggtggccgaggcacagcgtctggagatgccggccatcggtatg
accgaccacggcaacatgttcggtgccagcgagttctacaacgtcgccaccgatgccggg
atcaaacccatcatcggcatcgaggcgtacatcgcacccgggtcgcgcttcgacaccaag
cgtgtgctgtggggggatcgcagccagaagagcgacgacgtctccggcagcggtgcctac
acccacatgacgatggtcgccgagaacgcgaccggattgcgcaacctgttcaagctgtcc
tcgatggcctcgttcgagggtcaactcggcaagtggtcgcggatggacgccgaactgatc
gccgaacatgccgagggcatcatcgccacgacgggctgcccctcgggtgaggtgcagacc
cggctgcggctgggccacgttgacgaagcggtggccgccgccgccaagtggcaggagatc
ttcggcaaggagaactttttcctggagttgatggatcacggcatcgagatcgagcgccgg
gtccgggacggactgctggaggtgggccgcaagctcggcatccctccgctggccaccaac
gactgccactacgtgacgcgggaggcctcccacgcccatgaggcattgctctgtgtccag
accggtaagacactgtcggatccggcccggttcaagttcgacggtgacggttactacctc
aaatcggccgccgacatgcgcgcgctgtgggacagccaggtgccgggagcgtgcgactcg
accttgctgatcggcgaacgggtgcagtcctacgccgatgtgtgggccccgcgcgaccgg
atgccggtcttcccggtacccgaaggtcacaaccaggagacctggctgcgtcatgaggtc
gaggagggcctgctgcgtcgcttccccggcggggcgacacaggactatcacgaccgtgcc
gactacgagatcaaggtcatctgcgacaagggctttcctgcctacttcctgatcgtcgcc
gacctcatcaactacgcccggtcggtgaacatccgggtcggcccgggccgtggctcggcg
gccggttcgctggtcgcctatgccatgggcatcaccaatatcgacccgatcccgcacggg
ctgctgttcgagcggttcctgaacccggaacgcccgtcggctcccgatatcgacatcgac
ttcgacgatcgtcgccgcggcgagatggtgcgctacgcgtcggacaagtggggcagtgac
cgcgtcgcgcaggtcatcaccttcggcaccatcaagaccaaggccgcgctcaaggactcg
gcccgcgtcaactacggccagcccggcttcgccatcgccgatcggatcaccaaggcgctg
ccgccgccgatcatggctaaggacatcccgctctcgggtatcaccgaccccaagcatgag
cgctacaaggaagccgcggaggtgcgcggcctgctggacaccgaccccgatgtccgcacc
atctacgagaccgcccgcggtctggagggcctggtccgcaacgccggcgtacacgcctgt
gcggtgatcatgagctccgagccgctggtcgacgcgatcccgctgtggaagcgcccccag
gacggcgccatcatcaccggatgggactacccgtcgtgtgaggccatcgggctgctcaag
atggacttcctgggtctgcgcaacctcaccgtgatcggtgatgcgctggagaacatcaag
gccaaccgcggtatcgacctggacatggatcatcttccgctggaagatccggcgacctat
gagctgttgtcccgcggtgacacgctgggggtcttccagctcgacggcgggccgatgcgt
gacctgctgcgccggatgcagcccaccgggttcaacgacatcgtcgcggtgctcgcgctg
taccgcccgggtccgatgggcatgaacgcgcacaacgactacgccgaccgtaagaacggc
cggcaggcgatcaaaccgatccacccggagctcgaagagccgctcaaggagatcctggcc
gagacctacggtctgatcgtctaccaagagcagatcatgttcatcgcccagaaagtcgcc
ggctactcgatgggtaaggccgatgcgctgcgaaaggccatgggcaagaagaagcttgag
gtgctggaagccgagtacaagggcttcaaggagggcatgaccgccaacggtttctccgag
gccgcggtgaaagctttgtgggacaccattcttccgttcgccggatacgcattcaacaag
tcgcatgccgccggctacggcctggtgtcgttctggaccgcctatctcaaggccaactat
caggccgagtacatggcaggtctgttgacctcggtgggcgatgacaaggacaaggcggcg
atctacctgtcggactgccgccggctcgggatcaccgtgctgccgccggacgtcaacgaa
tcggtgcacaacttcgcctcggtcgggcaggacatccggtacggcctgggcggtgtgcgc
aacgtcggcaccaatgttgtgcagtcgatcatcaacgcgcgcaacgaaaagggtaagtac
accgacttttccgactacctcaacaagatcgacatcggcgcgtgcaacaagaaggtgacg
gaatcactggtcaaggcgggcgcctttgactcgctgggtcacccccgtaagggcctgttc
ctggtgcacgcggacgcggtggactcggtgctgggcaccaagaaggccgaggccatcggc
cagttcgatctgttcggcggcggcgatgccgactccgggatggagtcggtcttcaccatc
ccggtgcccgagggggagtgggacgacaagcacaagctcgccctggagcgggagatgctg
gggctgtatgtgtccggccatccgctggacggggtggcgcatctgctggccgctcaggtc
gatacccagatcccggcgatcctggaaggcgatatccccaacgacacccaggtgcgcatc
ggcggcatcctcgcctcggtgaaccgccgcgtcaacaagaacgggttgccctgggcctca
gcccaattggaagatctcaccggtgggatcgaggtgctgttctttccgcagacctacacg
gcgttcggtgccgatatcgccgatgacgcggtggtgctggtgggtgccaaggtggccatc
cgggatgaccggatctcgttgatcgccaatgacctcatcgtgccggacttctcgaacgcc
cagggtgaccgtcccgtggctgtcagcctgcctacgcggcagtgcacggtggacaaggtg
accgcactcaagcaggtgctggcgcgccacccgggaacctcgcaggtgcatctgcgactc
atcagcggtgagcgcatcaccaccttggagctcgatcagtccttgcgggtcacaccgtcg
tcggcgctgatgggtgacctcaaggcactgctcggccccggttgtctgggcggctga
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