Methanocaldococcus sp. FS406-22: MFS40622_0042
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Entry
MFS40622_0042 CDS
T01175
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfs03400
]
MFS40622_0042
Enzymes [BR:
mfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFS40622_0042
DNA repair and recombination proteins [BR:
mfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MFS40622_0042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
ResIII
Helicase_C
HHH_5
DEXQc_Suv3
DNA_pol_lambd_f
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADC68743
UniProt:
D3S6T3
LinkDB
All DBs
Position
complement(34271..36358)
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AA seq
695 aa
AA seq
DB search
MNKVLEVLKDFGIVELRPPQKKALGRGLLDKNKNFLISIPTASGKTLIGEMALINHLLDE
NKNPTGKKGIFIVPLKALASEKYEEFKSKYERYGLRIALSIGDYDEDEDLSSYNLIITTA
EKLDSLWRHKIDWIDDVSVVVVDEIHLINDETRGGTLEILLTKLKEFNIQIIGLSATIGN
PNELAEWLNAELIVDDWRPVELKKGIYKNGIIEYINGGNKEIKAVSDNEIYNLVVDCVKE
GGCCLVFCNTKKGAVNEAKKLNLKKFLTDEEKKKLKEIAEEILSILEPPTEMCKTLAECI
LNGSAFHHAGLTYQHRKIVENAFRERLIKVICATPTLSVGINVPCRRAIVKDLTRYTNKG
IRYIPIMEIQQCIGRAGRPGLDPYGEGIIVAKNDRDYLRAYQALTQKPEPIYSKLSNQAV
LRTQLLGLIATGEIRDEYDLEWFIRNTFYAHQYGNLREVAKNIMEVIGFLEENEFIVDFM
PTELGKRVSELYIDPLSAKYIIDGLNEMKNENELYYLYLISKTLEMMPNLRVYKSEELDL
INEMEALGIKSFDIEDLEAFKTAKMLYDWINEVPEDEILKRYKIEPGILRYKVENAVWIM
HALKEIAKIIGKSPDVPEKLEIRLEYGAKEDIIGLLSIKYIGRVRARKLYNAGIRSAEDI
INNPSKVASIIGEKIAKKILEELGVEYQEKEKLEI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagttttagaggttttaaaggactttggcattgtagaacttagaccaccacaa
aagaaggcattagggagaggcttattagataaaaataaaaattttttgatttctatacca
acagcttcaggaaaaacactaattggggagatggctttaataaaccatttattggatgag
aataaaaatccaactggtaaaaaaggtatttttatagtgcctttaaaggcattggcatca
gaaaagtatgaggagtttaaaagtaaatatgagaggtatgggttgagaatagctttatcg
ataggagattacgatgaagatgaggatttgagcagttataatttaattataacaactgcc
gaaaagctcgattcattgtggagacataaaattgattggattgatgatgtttctgttgtt
gtggttgatgaaattcatttaattaatgatgaaacaagaggaggaacattagagatttta
ttaactaaattaaaagaattcaatatacaaattattggtttatcagctacaataggaaat
cctaatgaattggctgaatggcttaatgctgagcttatagtcgatgattggagacctgtt
gagttaaaaaagggcatttataaaaatggcatcattgaatacataaacggaggaaataag
gagataaaagcagttagtgataatgaaatatataacttagttgttgattgtgtaaaagaa
gggggctgttgtttggtattctgcaacaccaaaaaaggagctgtaaatgaggcaaagaaa
ttaaatttaaagaaatttttaactgatgaagaaaagaaaaagctaaaagagatagctgaa
gaaattttatctattttagagccaccaactgaaatgtgtaaaactttagctgaatgtatt
ttaaacggctctgccttccatcatgctggtttaacttatcagcataggaagatagttgaa
aatgcctttagagaacggctgattaaggttatctgtgcaaccccaacccttagcgttgga
attaatgttccatgtagaagggcaatagttaaggacttaacaagatacacaaacaaagga
attaggtatattccaataatggagattcagcagtgtataggaagagctggaagaccaggc
ttagacccttatggagaaggaataattgtagcaaagaatgatagggattatttgagagct
tatcaagcactaactcaaaaaccagagccgatatattcaaagctctcaaatcaagcagtt
ttaagaactcagcttttgggacttatagctacaggagaaatcagagatgagtatgattta
gaatggtttataagaaataccttctatgcccaccaatatggaaatttgagggaggtagct
aagaacattatggaagttattggatttttagaggagaatgagtttattgttgattttatg
ccaactgaattaggaaagagggtttctgagctatatatagacccgttgtcagctaaatat
attatagacgggttaaatgaaatgaaaaatgagaatgagctatactatctctaccttata
tcaaaaaccttggagatgatgccaaatttaagagtttataaatctgaggagttagattta
attaatgaaatggaagctcttggcataaaaagctttgatatagaagatttagaggcattt
aaaactgctaagatgttgtatgattggattaatgaagtgccagaggatgagattttaaag
agatataaaattgaaccagggattttaagatataaggttgaaaatgccgtttggataatg
catgcattaaaagagattgccaaaataattggcaaaagcccagatgtcccagagaagtta
gaaataaggttggagtatggagctaaggaagatattattgggctgttgagcataaagtat
attggaagggttagagcaagaaagctatacaatgctggaattagaagtgctgaagatatt
ataaacaacccttcaaaggttgcctcaatcattggagaaaagatagctaaaaagattttg
gaggagttgggagttgaatatcaagaaaaagaaaaattggagatataa
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