Methanocaldococcus sp. FS406-22: MFS40622_0125
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Entry
MFS40622_0125 CDS
T01175
Name
(GenBank) rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_0125
Enzymes [BR:
mfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MFS40622_0125
Transfer RNA biogenesis [BR:
mfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFS40622_0125
Prokaryotic type
MFS40622_0125
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
GIDA
Motif
Other DBs
NCBI-ProteinID:
ADC68825
UniProt:
D3S715
LinkDB
All DBs
Position
113355..114365
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AA seq
336 aa
AA seq
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MILLEKTQEKKANKGEELIVKEKAETNWDYGCNPYERKIEDLIKYGVVVIDKPRGPTSHE
VSTWVKKILKLDKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYICLMHLHRDAS
EEDILRVFKEFTGRIYQRPPLKAAVKRRLRIRKIHELELLDKEGKDVLFRVKCQSGTYIR
KLCEDLGEALGTSAHMQELRRVKSGCFEEKDAVYLQDLVDAYVFWKEDGDEEELRRVIKP
MEYGLSHLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKA
LMNTKEILNADKGIAVDVERVYMDRGTYPRMWKRKK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgattttgttggaaaaaacacaggaaaaaaaggcaaataaaggagaggagcttatagtt
aaggaaaaggctgaaacaaactgggattatggctgtaatccatatgaaagaaagatagag
gatttgataaaatatggtgttgttgttattgacaagccaagagggcctacctctcatgag
gtttcaacatgggtaaagaagattttaaagttggataaagctggacatggtggaacatta
gaccctaaggttactggtgttttgcctgttgcattagagagagctacaaaaacaatacca
atgtggcacatcccacctaaggaatatatttgcttaatgcatctacatagggatgcttcc
gaagaagatatattgagagtttttaaagaatttacaggaaggatttatcaaagaccacca
ttaaaagcagctgttaaaagaagattgagaataaggaagattcatgagttagagttatta
gataaagagggtaaggatgttttatttagagttaaatgtcaatctgggacttatataaga
aagttatgtgaagatttaggggaagcgttagggacatctgcccacatgcaagagttaagg
agagttaaaagtggatgctttgaggaaaaagatgccgtttatttgcaggacttagttgat
gcttatgtattttggaaagaggatggggatgaggaagagttaaggagagttataaaacca
atggagtatggattgagtcatttaaaaaaggttgttgttaaggattctgctgttgatgct
atttgccacggagcagatgtttatgttagaggaatagctaaattgagtaagggtattggt
aaaggggagacagttttagttgagactttgaagggagaagctgtagctgtaggaaaagct
ttaatgaacacaaaagagattttaaatgcagataaaggtattgctgttgatgttgagagg
gtttatatggatagaggaacttatccaaggatgtggaagaggaagaagtag
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