Methanocaldococcus sp. FS406-22: MFS40622_0326
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Entry
MFS40622_0326 CDS
T01175
Name
(GenBank) Helix-turn-helix type 11 domain protein
KO
K07730
putative transcriptional regulator
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfs03000
]
MFS40622_0326
Transcription factors [BR:
mfs03000
]
Prokaryotic type
Helix-turn-helix
Other families
MFS40622_0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR_2
MarR
HTH_Crp_2
HTH_11
HTH_5
HTH_45
Fe_dep_repress
DUF7343
Rrf2
TrmB
wHTH-PRTase_assc
HTH_36
HTH_27
HTH_10
HTH_28
HVO_A0261_N
HTH_20
NirdL-like_HTH
HTH_40
HTH_3
HTH_34
GntR
HTH_Mga
WHD_RNase_R
GerE
HTH_IclR
RepL
Mrr_N
Mnd1
HTH_69
DUF4423
Sigma70_r4_2
EAP30
Topoisom_bac
LexA_DNA_bind
Staph_reg_Sar_Rot
DnaD_N
UPF0444
WHD_MCM8
HTH_23
Sigma70_r4
CoiA_C
PF0610-like_N
HTH_39
Motif
Other DBs
NCBI-ProteinID:
ADC69022
LinkDB
All DBs
Position
complement(313379..314164)
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AA seq
261 aa
AA seq
DB search
MKKRNITEFQVLSEIIRKQPHIKQKEIAENLGITVQAVSEHIRNLVKEGYVKSRGRGEYV
VTEKGLRKLKNWISEFREYLDEINTAVYRYKDIWPAIAEEDIKDGETVYLFMKNGLLYAS
KEPKGEAKAKALYGGKRGEDIAICEIKGIIDVPKGKVIVFRIPPEVVGGSRAVDFDLIKN
NLNNLDDYVIATMGTVAYVVAHKLGLKPDIRFAVPEAIVNACNRGCNVVALITGKMAEKV
IKKLDNAKISYTVLDATKENM
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaaatataactgaatttcaagttttatctgaaatcataagaaagcaacca
catataaaacagaaagagatagctgagaatttaggaataacagttcaggcagtttcagag
catataagaaacctggttaaagagggttatgtgaaatcaaggggtagaggggagtatgta
gtaactgaaaaaggtttaagaaagttaaaaaactggatatcagagtttagagagtattta
gatgaaataaacactgctgtctatagatacaaagatatatggcctgctattgcagaagag
gacattaaagatggagaaacagtatatctatttatgaaaaatggtttgctatatgcatca
aaagaaccaaaaggggaagcaaaagcaaaggcattatatgggggaaagaggggagaagat
atagcaatatgtgaaattaaaggaattattgatgtgcctaaaggaaaagtaatagtgttt
agaatcccacctgaagttgttggtggttcgagagctgtggactttgatttaataaaaaat
aatcttaataatttagatgactatgtgattgctactatgggaactgttgcttatgttgtt
gcacataagttagggcttaagccagatataagatttgccgtgcctgaagctattgtaaat
gcatgcaatagaggatgtaatgttgttgccttaataactggaaagatggctgaaaaagtt
attaaaaagcttgataatgcaaaaattagctatactgtattagatgcaactaaagaaaac
atgtga
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