Methanocaldococcus sp. FS406-22: MFS40622_0511
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Entry
MFS40622_0511 CDS
T01175
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_0511
Enzymes [BR:
mfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MFS40622_0511
Transfer RNA biogenesis [BR:
mfs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MFS40622_0511
Prokaryotic type
MFS40622_0511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF3023
Motif
Other DBs
NCBI-ProteinID:
ADC69203
UniProt:
D3S843
LinkDB
All DBs
Position
complement(492055..493017)
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AA seq
320 aa
AA seq
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MIIMKLIFLGTGAAVPSKNRNHIGIAFKFGGEVFLFDCGENIQRQMLFTEVSPMKINHIF
ITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEVIENSLKLGAHYIEFPIKVYEI
YAKEPITVYNEENYEIIAYPTEHGIPSYAYIFKEIKKPRLDIEKAKKLGVKIGPDLKKLK
NGEAVKNIYGEIVKPEDVLLPPKKGFCLAYSGDTIPLEDFGKYLKELGCDVLIHEATFDD
FSKDIAKENMHSTIGDAVNIAKLADVKILILTHISARYDKEEYFNLYKMNVKQYNESFKI
IISEDFMVYDIKKEIVEVKK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgattattatgaaactgatattcttaggaactggggcggcagttccatcaaaaaatagg
aatcatatagggatagcatttaaatttggaggagaggtttttttatttgattgtggtgaa
aatattcaaaggcagatgctttttactgaagtatcaccaatgaaaattaaccatatattt
ataactcatctacatggagaccatatactaggcattccaggacttttacagagtatggga
ttttttggaagagagaaagagcttaaaatcttcggccctgaaggaacaaaggaagttata
gagaactcattaaagcttggagctcattatatagaatttccaataaaagtctatgaaatt
tatgcaaaagagccaataactgtttataatgaagaaaattatgagataattgcctatcca
actgaacacggcattccttcttatgcatacatatttaaagagataaaaaaaccacgttta
gatattgagaaagctaaaaagcttggagttaagatagggccggatttaaaaaaactaaaa
aatggagaggctgttaaaaatatttatggagaaattgtaaagccagaagacgttttgtta
cctccaaaaaaaggattttgtttagcttacagcggagataccattccattagaagatttt
ggaaaatatttgaaagagttgggatgtgatgtcttaattcatgaagcgacatttgatgat
ttttccaaagatattgccaaagagaatatgcactctacaataggagatgctgtcaatata
gcaaaattggcagatgtaaaaattttaattttgactcatatctcagcaaggtatgataag
gaggagtatttcaacttatataaaatgaacgttaaacagtataatgagagctttaagatt
attatcagtgaagatttcatggtttatgatataaaaaaagaaattgtagaggtgaaaaaa
tga
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