Methanocaldococcus sp. FS406-22: MFS40622_0564
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Entry
MFS40622_0564 CDS
T01175
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_0564
Enzymes [BR:
mfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MFS40622_0564
Transfer RNA biogenesis [BR:
mfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFS40622_0564
Prokaryotic type
MFS40622_0564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
BRICHOS
Toxin_trans
ARM_CUL7_CUL9
DUF4211
Motif
Other DBs
NCBI-ProteinID:
ADC69255
UniProt:
D3S895
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All DBs
Position
complement(547275..548465)
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AA seq
396 aa
AA seq
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MKLRMKPEDFIVEEIIDFDKISGNKCYLYKLTKRNIESLKAFSYISKKFKIPLRDIGYCG
LKDRHALTTQYISIPKKYGKLSLDEPNLKLELVGESKFLLLGDLEGNRFTITVRGIKKDD
IPKIKENLKYLEFGAPNYFDSQRFGSVFDKKFIAKEVIKGNYEEAVKILLTKYKKSEKKI
IKDLKRFISKNWGDWDKVWNYIKENNIKAKLYVNMVKELKKSNDYKKALSYVDDRLKKIF
VAAYQSYLWNECVKELLKKYIPEEDRVYYEYECGTLMFYKKMDREVFNLLKDKKFPTIAP
DIEYSGEEKEIIEEILKREGITMEDLNNIGGLGRFIYNERKILSVPKNLKIGEFEEDELN
KGKYKITLSYELEKGSYATIIIKRAFLGVKTKKRKR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttagaatgaagccagaggattttatcgttgaagaaattatcgattttgataaa
atatctgggaataagtgttatctctacaaattaacaaagagaaacatagaaagtttgaaa
gcattttcttatatatcaaagaaatttaaaattccgttgagagatattggttattgtgga
ttaaaagatagacatgctttaaccactcaatatatatccataccaaaaaaatatgggaag
ctaagcttagatgaaccaaatttaaagttggaattagttggagaatcaaaatttttgtta
ttgggagatttggaaggaaacagattcacaataacagttagagggataaaaaaggacgat
atcccaaaaataaaagaaaatttaaaatacttagaatttggagctccaaattactttgat
agtcagaggtttggaagtgtttttgataaaaagtttattgcaaaagaggttataaagggc
aattatgaagaagctgtaaaaatactattaacaaaatacaaaaagtctgagaagaagata
ataaaagatttgaagagatttatatctaaaaactggggagattgggataaagtttggaat
tatattaaggaaaataatattaaggcaaagttgtatgtaaatatggttaaagagcttaaa
aaaagcaatgattacaaaaaagccttaagttatgttgatgatagattgaagaaaattttt
gtcgctgcttatcaaagttatctatggaatgagtgtgtaaaagagctattaaagaaatac
ataccagaagaagatagggtttattatgaatacgaatgtggaactctcatgttctataaa
aaaatggatagagaagtttttaatttattgaaagataaaaaattcccaacaatagctcca
gatattgaatatagcggagaagaaaaagaaattattgaggaaatcttaaagagagaaggt
attactatggaagatttaaacaatatagggggtttaggaagattcatatacaatgaaagg
aaaattctctcagtccctaaaaacctaaaaattggagagtttgaagaagatgagttaaat
aaagggaagtataaaataaccttaagctatgaattggagaagggaagttacgcaacaatt
ataataaagagggctttcttaggagtaaaaactaaaaaaagaaagagatag
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