Methanocaldococcus sp. FS406-22: MFS40622_0600
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Entry
MFS40622_0600 CDS
T01175
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfs03032
]
MFS40622_0600
03400 DNA repair and recombination proteins [BR:
mfs03400
]
MFS40622_0600
Enzymes [BR:
mfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MFS40622_0600
DNA replication proteins [BR:
mfs03032
]
Prokaryotic type
DNA Topoisomerases
MFS40622_0600
DNA repair and recombination proteins [BR:
mfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MFS40622_0600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Intein_splicing
Toprim
DUF1272
DmmA-like_C
PT-HINT
ADK_lid
Zn_ribbon_3
Zn_Ribbon_1
Hint
Zn_ribbon_NUD
DZR
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ADC69290
UniProt:
D3S8D0
LinkDB
All DBs
Position
complement(587966..590887)
Genome browser
AA seq
973 aa
AA seq
DB search
MTALIICEKPSVAKKIANALGKAKKKSIDGVPYYELERNGKKIIVASAVGHLFTLVEKEN
KEFGSYPVFDIKWVPASVEKGKEYVNKYIKALKKLSKEADEFYIATDWDIEGELIGYHAL
KYCCGKEKAKRMRFSSLTKKEIVKAFENPDEIDYGLVDAGESRHIVDWYFGINLSRALMN
AIRAVNRWKTMSIGRVQGPALAFLTERELEIKKFVPKPYWVIEALFKDNLKAIHEKEKFW
DEKEAKSVYEKIKNEKFGKVVEIKKTKRKIKPLPPFDLGTLQREAYSYFKISPKETQEIA
QSLYEKGLCLHPDTLILLPDGIKKIKDLDDEGEVLCLNKDLKLTKSKYKLLKRTIKEKLI
KITLNDGTELITTKEHPILVYRDELIFIPAEKLKENEQVVMFINNSEKTFKIKKTKFIDF
ILENKKYSHHYSIICTSDWKNKFKSGIAKKFDLSNQLSKNKGLSLDRLRKLSNYIIDRDL
KRIANGDVYIQKIKKIEEIEYEGEVYDLTVKDYHNFIANGIVVHNCSYPRTSSQKLPKDR
KYLEDILNIIKNHPVYGKWAERILKENLKPVEGKKEDPAHPAIHIVDIPKEELSEKEKKI
YDLIARRTLAAFWDNAEREYLNVKVDIKGEKFKLSGSRTVKEGWHEIYYFPKFDEIELPA
LKKNDIIKVEKITITRKETQPPKRYTVASIIKELEKKGLGTKATRAEIVDKLIKRGYVID
DGSLKVTDLGISVIETLKKFCPEIIDEKMTRDLEEKLEKIQFRKIKKDDVLEEAEKRLRK
ILEEFKKKEEDIGIYLIKNLDATNKKAKIVGKCPKCGGDLILIRHKKGRFVGCSNYPECD
VKYSLPDKGRIKIPNKVCEACKSPILKIGDREVCINPECPLKQVEVKEDDRICPKCGAKL
VLKKGIYGAFYGCSNYPKCKYTEPINKKEVVGKCPKCGGDLVVRDGKFGKFVGCSNYPKC
KYTEKLKSNEKEK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgttaataatctgtgaaaagccgagtgttgccaaaaagatagcaaatgcttta
ggtaaagcaaagaaaaagagcattgatggagtcccatactatgaattagaaagaaatgga
aaaaagattatagtggcaagtgctgttgggcatctatttaccttagttgaaaaggaaaat
aaagaatttggctcatatccagtttttgatataaaatgggtgcctgcaagtgttgaaaag
ggaaaagaatatgttaataaatacataaaggcattaaaaaagctctcaaaagaggcagat
gaattttatatagccacagattgggatattgaaggggagttaattggttatcatgcatta
aaatattgttgcggaaaagaaaaagcaaagagaatgagattctcatccttaacaaaaaaa
gagatagttaaagcttttgaaaatccagatgaaattgattatggcttagttgatgctgga
gagagtaggcatattgtagattggtattttggaataaacctatcgagagctttaatgaat
gccataagggcagtgaatagatggaaaacaatgagtattggtagagttcaaggccctgca
ttagcttttttaactgaaagagagttagaaattaaaaaattcgttcctaaaccatattgg
gttattgaagctctatttaaagataatttaaaagccatacatgagaaagagaagttttgg
gatgaaaaagaggcaaaaagtgtttatgaaaaaataaagaatgaaaaatttggtaaggtt
gttgaaataaagaaaactaaaaggaagataaaacctctcccaccttttgacttaggaact
ttacagagagaggcttacagttattttaaaatatctccaaaggaaacgcaagaaattgcc
caaagtttgtatgagaaagggctttgcctacatccagatacgttgatattattgccagat
ggaattaaaaagattaaagacttagacgatgaaggagaggttttatgcctaaataaagac
ttaaaactgacaaaatcaaaatataaacttttaaaaagaactataaaagaaaaattgata
aaaattactttaaatgatggaactgaacttatcactacaaaggagcatccaattttagtt
tatagggatgagttaatatttataccggctgaaaaattaaaagaaaatgagcaagtagta
atgtttataaataattcagaaaagacatttaaaattaaaaaaactaaatttattgatttt
atattagaaaataaaaaatattctcatcattatagcattatctgcacttcagattggaaa
aataagtttaaatctggaattgcaaagaaatttgacctatctaaccaattatcaaaaaat
aaaggtttaagtttagatagattaagaaagttatctaattatatcatagacagagattta
aaaagaattgctaacggagatgtttatattcaaaaaatcaaaaaaattgaagaaattgaa
tatgaaggagaggtttatgatttaactgtcaaagattaccacaactttatagcaaatggt
atagttgtgcataactgttcatatccgagaacatccagccaaaaacttccaaaagataga
aagtatttggaagatatcctaaatataataaaaaatcatccagtttatggaaaatgggct
gagagaattttaaaagagaatttaaagccagttgaagggaagaaagaagaccctgcacat
cctgcaatacatattgtagatattccaaaagaagaactttcagagaaagaaaagaaaatt
tatgatttaatagcaagaagaactttagccgctttttgggataatgcagagagagaatat
ttaaatgtaaaagttgatatcaaaggagagaaatttaagttatctggttcaaggacagta
aaagagggttggcatgagatatattacttcccaaaatttgatgagattgaattgccagca
ttaaagaaaaatgatataatcaaagttgaaaagataacaataacaagaaaagaaacacag
ccaccaaaaagatatactgttgcaagtattataaaagaattagaaaagaaagggttagga
acaaaggcaacaagagcagagattgtagataaactaataaaaagaggctatgttattgac
gacggctctttaaaagtaactgatttagggatttcagtaattgagacattaaaaaagttc
tgcccagagattattgatgaaaagatgacaagagatttagaagaaaagttagaaaagata
cagtttagaaaaattaaaaaagatgatgttttagaagaagctgagaaaagattgagaaaa
atattagaagagtttaaaaagaaagaggaagatattggaatttatcttattaaaaactta
gatgctacaaataaaaaagcaaaaattgttgggaaatgtccaaagtgtggaggagactta
attttaataaggcataaaaagggcaggtttgttggttgctctaactatcctgaatgtgat
gtaaagtattctcttccagataaaggaagaataaaaatcccaaataaagtttgtgaagca
tgcaaatcccctattttaaaaattggagatagagaggtttgtattaatccagaatgtcct
ttaaagcaagtagaggttaaagaagatgacagaatctgccctaagtgtggagctaagctg
gttttaaagaaggggatttatggagcattttatggttgttcaaattatccaaagtgtaaa
tacacagaaccaataaataaaaaagaggttgtaggaaaatgccctaaatgtggaggagat
ttagttgttagagatggaaaatttggaaagtttgttggttgctctaactatccaaaatgt
aaatacactgaaaaactaaaatcaaatgaaaaagaaaaataa
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