KEGG   Methanocaldococcus sp. FS406-22: MFS40622_0611
Entry
MFS40622_0611     CDS       T01175                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mfs  Methanocaldococcus sp. FS406-22
Pathway
mfs03030  DNA replication
mfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MFS40622_0611
   03410 Base excision repair
    MFS40622_0611
   03450 Non-homologous end-joining
    MFS40622_0611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfs03032]
    MFS40622_0611
   03400 DNA repair and recombination proteins [BR:mfs03400]
    MFS40622_0611
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mfs04147]
    MFS40622_0611
DNA replication proteins [BR:mfs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MFS40622_0611
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MFS40622_0611
DNA repair and recombination proteins [BR:mfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MFS40622_0611
Exosome [BR:mfs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MFS40622_0611
SSDB
Motif
Pfam: XPG_I XPG_N UVR COG4_N Sarcoglycan_2_C HSCB_C OST48_MD
Other DBs
NCBI-ProteinID: ADC69299
UniProt: D3S8D9
LinkDB
Position
complement(604277..605257)
AA seq 326 aa
MGVQFGDFIPKKIISFEDLKGKKVAIDGMNALYQFLTSIRLKDGSPLRNRKGEITSAYNG
VFYKTIHLLENDITPIWVFDGEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKY
AKRVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYG
SPRVVRNLTTTKEMPELIELNEVLEDLRISLDDLIDIAIFMGTDYNPGGVKGIGFKRAYE
LVRSGVAKDVLKKEVENYEEIKRIFKEPKVTDSYSLSLKLPDKEGIIKFLVDENDFSYER
VKKHVDKLYNLIANKTKQKTLDAWFK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggagtgcagtttggtgattttataccaaaaaagattatctcctttgaggatttaaaa
ggaaaaaaagtagctattgatggaatgaacgcattatatcaatttttaacatctataaga
ttgaaggatggttcaccattaagaaataggaagggagagataacctctgcctacaacgga
gttttttataaaactatccatttgttagagaatgacataactccaatctgggtttttgat
ggtgagccaccaaaattaaaggaaaaaacaagaaaagttagaagagagatgaaggagaag
gcagagcttaagatgaaagaggccataaaaaaagaggattttgaggaagcggctaagtat
gcaaagagagttagctatctaactccaaaaatggttgaaaactgcaagtatctgctaagc
ttaatgggaatcccttatgttgaagctccttctgaaggagaggcacaagcaagctatatg
gcaaagaaaggggatgtttgggctgttgtaagtcaagattatgatgctttgttgtacggc
tctccaagggttgttaggaacttaacaactacaaaggagatgccagagttaattgagctg
aatgaggttttagaggatttaaggatttctttagatgatttgatagatatagccatattt
atggggactgattataatccaggaggagttaagggtattggatttaaaagggcttatgag
cttgttagaagtggagtagctaaggatgttttaaagaaagaggttgagaactatgaagag
attaaaaggatatttaaagagccaaaggttaccgacagctattcactaagcttaaaactt
ccagataaagagggaattataaaattcttagttgatgaaaatgattttagctatgagaga
gttaaaaagcatgttgataagctctataacttaattgcaaataagacaaagcaaaaaaca
ttggatgcatggtttaaataa

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