Methanocaldococcus sp. FS406-22: MFS40622_0624
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Entry
MFS40622_0624 CDS
T01175
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfs03400
]
MFS40622_0624
DNA repair and recombination proteins [BR:
mfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MFS40622_0624
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HerA_C
HAS-barrel
TrwB_AAD_bind
AAA_10
CbiA
T4SS-DNA_transf
Ntox43
Motif
Other DBs
NCBI-ProteinID:
ADC69312
UniProt:
D3S8F2
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All DBs
Position
complement(616887..618389)
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AA seq
500 aa
AA seq
DB search
MKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDNKEVLGVIKNVVADIEKFVGEVKVIGVL
EGNKIIPNRTPILPNSEVRLCDDETLTNLYLTPDGLNIGHLLTRDNVRVYLDTNKLVSRH
FAILSITGGGKSNTVSVLCRELAKKNGTVIMIDPHGEYTSLYHEDLEGKIKVINPTINPV
LLTPSEFANLIGIGDNEIEKRVYIEFAYHTVKHEYPDAKGIEFIEKIENILYEWSKIASV
GWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDIISKFKLEYALNIGDKDVIEEFEIGKIN
IVNLSGLEIPQMVTFVGFIAKHLFSKRISYLKSLKDVYSINEEIRRVAQSNLDIIESHYK
VVTKPMLLIVEEAHIFIPINESNSASLWLGKIAREGRKFGVGLGLVSQRPKQLHPDVLSQ
TNTKIILRIVEPEDQKYIQRASEELGEDLAKDLASLGIGEAIIVGNAISLPSIVKIDKFD
GVYGGKDINIVGEWMGLDDW
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaggaaaaactacaacaacacatttcactttcgaatcccttgaaaagata
agatttggagagtatgtaattgcaaaaaatgttgataacaaggaggtattaggggttatt
aaaaatgtagttgcagatattgagaaatttgttggtgaagttaaagtcattggtgtactg
gaaggaaataaaataatcccaaacagaacaccaatactcccgaacagtgaggttagattg
tgtgatgatgagacactaactaacctatatctaactccagacgggttgaacataggccat
ttgctgacaagagataatgttagggtttatttagatacaaataaactcgtatcaagacat
tttgctatactctctataactgggggaggtaagtcgaatactgtatctgttttatgtaga
gaacttgcaaagaaaaatggaactgtaataatgatagaccctcatggggaatacacttcc
ttatatcatgaagacctggaggggaaaataaaggtaataaatccaacaataaaccctgtt
ttattaactccaagtgaatttgctaatttaattgggataggggataatgagatagaaaag
agagtttatatagaatttgcataccatactgtaaaacatgaatatccagatgctaaaggg
attgagtttattgaaaaaatagaaaatatactctatgagtggagtaagatagcatcagtt
ggctgggaaattaaatattacaacccgttaagaagaaattacgatagaagaaaattagaa
aaggaagatttcgttatattaatgtctctcattgatattattagcaaatttaaattagag
tatgcactaaatattggggataaagatgtaatcgaagaatttgaaattggaaaaataaac
atcgttaatttaagcggattggagattcctcaaatggtaacttttgttggttttatagcc
aaacatcttttttcaaaaaggatatcatacttaaaatcattaaaagatgtatatagtatt
aatgaggaaattagaagagttgcacagtcaaacttagacattattgaatcacactacaaa
gtagtaacaaaacctatgctgttaattgtggaagaagcccatatctttattccaataaac
gagagtaattcagcaagcttatggttggggaaaatagcaagagagggtaggaaatttggt
gttggcttaggtttagtatctcaaaggcctaagcaattacatccagatgttttatctcaa
acgaacactaagataattttaagaatagtcgaaccagaagaccaaaaatatattcaaagg
gcttcagaagagttaggtgaagatttagcaaaggatttagcttctttaggtattggagaa
gcgattatagtaggaaatgcgatatctctaccatcaatagttaaaattgataaatttgat
ggggtatatggaggaaaggatataaatatagttggagagtggatgggtttagatgattgg
taa
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