Methanocaldococcus sp. FS406-22: MFS40622_0720
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Entry
MFS40622_0720 CDS
T01175
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_0720
Enzymes [BR:
mfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MFS40622_0720
Transfer RNA biogenesis [BR:
mfs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MFS40622_0720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Corona_NS2A
Acb1
Motif
Other DBs
NCBI-ProteinID:
ADC69406
UniProt:
D3S8P6
LinkDB
All DBs
Position
720412..720933
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AA seq
173 aa
AA seq
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MRLFLAIDIPKEIKEEIAKFQEQFKMKGIKLVEKENLHITVKFLGEVDEEKLKEILDLDL
SIQPIKIKLKTLGTFPNSNYIRVIWIGAYNNNLVEIFKEIDKKLSNLGFKREREYIPHLT
IGRVKFIDNKKKLKDRVEKYKDIDFGEFEARHIKLYKSTLTPNGPIYEVIKEW
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgtttttagcaattgatatcccaaaagagataaaagaagaaatagctaagttt
caggagcaatttaaaatgaaagggataaagttggttgaaaaagagaacttacatataaca
gttaaattcttaggagaggttgatgaagaaaaattaaaagaaatattggatttagattta
tcaatccagccaataaagataaagttaaaaaccttaggaacattcccaaactctaactac
ataagagttatatggattggagcttataacaataatcttgtagagatttttaaagaaatt
gataaaaaactatcaaatttaggttttaaaagagaaagggaatatatccctcatttaaca
ataggtagagttaaatttattgacaacaagaaaaaattaaaggatagggttgaaaaatac
aaagatattgactttggagagtttgaggcaaggcatataaagctctataaatcaacccta
acaccaaacgggccaatctatgaagtgataaaagagtggtag
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