Methanocaldococcus sp. FS406-22: MFS40622_0938
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Entry
MFS40622_0938 CDS
T01175
Name
(GenBank) THUMP domain protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_0938
Enzymes [BR:
mfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MFS40622_0938
Transfer RNA biogenesis [BR:
mfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFS40622_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
CGI-121
Motif
Other DBs
NCBI-ProteinID:
ADC69619
UniProt:
D3S455
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All DBs
Position
931932..933257
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AA seq
441 aa
AA seq
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MEIINYEILKKYPLCDRCFGRLYAKLLHTTNTERGKALKLYKALELEAKIKKAKEKGINY
EEELELLKALARSGVDEIRLEDIEVEKENCPWCKGIFNKQKMEKLLNKAIELLKEYDFDT
FLIGTHIPKEIKELEKEIETEFMESIKQEFGREFGKMLAVRLDKAPNKEYPDIVVHINPY
TEEIYLQINPLFIKGRYRKLVRGIPQTRWPCRKCRGKGCELCNYTGKKYPISVEEIIAKP
FLEATKGVDAKFHGAGREDIDVRMLGDGRPFVLEIKEPKIRKIDLNKIAEEVNKDGRVEV
LNLEFGVRKDKVIFKNTPHRKTYRALVECSDKITDEELKLLEKELENRTIYQKTPKRVLH
RRADLERIRKVYKVKTSKVDDNHFEMIIYCDGGLYIKELISGDDGRTNPSVSSILNKNCI
CKELDVLKIHDNEGENYGSNE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagattataaactatgaaatattaaaaaaatatcctctctgcgataggtgctttgga
agattgtacgctaagttattacatacaacaaacactgaaagaggtaaggcattaaagtta
tataaagctttggaacttgaggcaaagataaaaaaagctaaggaaaaaggaataaattat
gaggaggagttggaattattaaaagctttggcaaggagtggagttgatgaaataagattg
gaagatatagaggtagaaaaagaaaactgcccatggtgtaaaggcatttttaacaaacaa
aaaatggaaaagttgttaaataaggcgattgaacttttaaaagaatatgattttgataca
tttttaattggaactcatatcccaaaagagattaaagagcttgaaaaagagattgaaaca
gaatttatggagagtataaaacaggaatttgggagagaatttgggaagatgttagctgtt
aggttggacaaagccccaaataaagaatatccagatatagttgttcatataaatccatac
actgaagaaatctatctacagataaatccattatttattaaaggaagatatagaaaatta
gttagaggtattccacaaacaagatggccttgcagaaagtgtagaggaaaaggttgtgag
ctatgcaactacacaggcaaaaaatatccaatatctgttgaagaaatcattgctaaaccg
ttcttagaagctacaaaaggagtagatgcaaaatttcatggggctggaagggaagatata
gacgttagaatgcttggagatggaaggccatttgttttagagattaaagagccaaagata
agaaaaattgatttaaataaaattgctgaagaagttaataaagatggtagggtagaggtt
ttaaacttagagtttggtgttagaaaggataaagttatatttaaaaacaccccacataga
aaaacatatagagccttagttgaatgctctgataaaattactgatgaagaactaaaactc
cttgaaaaagagcttgaaaatagaactatctatcaaaaaacaccaaaaagggttttacat
agaagagctgatttagagagaatccgtaaggtatataaagttaaaaccagtaaagtagat
gacaatcattttgagatgattatatattgtgatggtggattatatataaaagagctaatc
agtggagatgatgggagaacaaacccatctgtctcatctatattaaacaaaaactgtata
tgtaaggaattggacgttttaaaaatacacgataatgaaggtgagaattatggttcaaat
gagtga
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