KEGG   Methanocaldococcus sp. FS406-22: MFS40622_1274
Entry
MFS40622_1274     CDS       T01175                                 
Name
(GenBank) AAA ATPase central domain protein
  KO
K04800  replication factor C large subunit
Organism
mfs  Methanocaldococcus sp. FS406-22
Pathway
mfs03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MFS40622_1274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfs03032]
    MFS40622_1274
DNA replication proteins [BR:mfs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MFS40622_1274
SSDB
Motif
Pfam: AAA Rad17 RCF1-5-like_lid RuvB_N DUF815 AAA_22 AAA_14 IstB_IS21 AAA_28 AAA_assoc_2 NACHT AAA_33 nSTAND3 AAA_5 Zeta_toxin AAA_17 NPHP3_N Mg_chelatase AAA_18 AAA_16 AAA_25 RNA_helicase AAA_7 DNAX_ATPase_lid AAA_30 AAA_19 ABC_tran Sigma54_activ_2 Hda_lid ORC-CDC6-like Viral_helicase1 AAA_11
Other DBs
NCBI-ProteinID: ADC69951
UniProt: D3S537
LinkDB
Position
complement(1256300..1257847)
AA seq 515 aa
MLSWVEKYRPKSLKEVAGHDKVKEKLKTWIESYLKGEHPKPILLVGPPGCGKTTLAYALA
NDYGFEVIELNASDKRSASVIKKVVGHAATSSSIFGKKFLIILDEVDGISGKEDAGGVSE
LIKVIKKAKNPIILTANDAYAPAIRNLLPYVEVIQLNPVHTNSVYKVLKKIAQKEGLDVD
DKTLKMIAQHSAGDLRSAINDLEALALSGDLSYEAAQKLPDRKREANIFDALRVILKTTH
YGIATTALMNVDETPDVVIEWIAENVPKEYEKPEEVARAFEYLSKADRYLGRVMRRQNYS
FWKYATTLMTAGVALSKHEKYRKWTPYSYPKIFRLLTQTKAEREILNKILKKIGEKTHTS
SKRARFDLQMLKILAKENPSIAADLVDYFEIKEDELKVLVGDKLASEILKILKEKKKLER
KKKKEKEKLEKEKKKEEAKEEQPIIQPKEVEEKEEIKAEVEKKIEEEKKEEEIKEKIEEK
PKVEEVKEKTKKEKKKERKKKEDKGKQLTLDAFFK
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgttaagttgggtagagaagtatagaccaaaatctttaaaagaagttgctgggcatgat
aaagttaaagaaaagctaaaaacatggattgagagttatttaaaaggggagcatccaaaa
ccaattttattggtggggcctccaggttgtggaaagacaacgttagcttatgcattagca
aacgattacggatttgaagttattgaactaaatgcgagtgataaaagaagtgcttcagtc
ataaaaaaggttgtaggacacgctgctacttcatcatctatctttggaaaaaaattttta
attatactggatgaggttgacggaatctctggaaaggaggatgccggaggggtttctgag
ctaataaaagttataaagaaggcaaagaacccaataattttaactgcaaatgatgcttac
gctccagcaataagaaatctcctcccttatgttgaggtaatccagctaaacccagtccat
acaaactctgtttataaagttctaaaaaagatagcacaaaaagaggggcttgatgtggat
gacaaaacgctaaagatgattgcccagcattcagctggagatttgaggagtgcaataaat
gacttagaggctttagcattatctggagatttgagttatgaggcagcccaaaaattgccg
gataggaagagagaggcaaatatatttgatgctttaagggttattttaaaaactacccac
tatgggatagctacaactgctttaatgaatgtggatgaaacaccagatgtcgttatagag
tggatagctgaaaacgttccaaaagagtatgagaagccagaagaagttgcaagagctttt
gaatacctctcaaaggcagatagatatttaggcagagttatgagaaggcagaactacagt
ttttggaagtatgcaacaacgttaatgactgctggggtagccttatcaaagcatgaaaag
tatagaaaatggacaccttacagctatccaaagatttttagattattaactcaaacaaaa
gctgagagagagatattaaataaaatattaaaaaagataggagaaaaaacccatacatca
tcaaagagggcaaggtttgatttgcagatgcttaaaatcttagctaaagaaaatccttct
atagctgctgatttagttgattattttgaaataaaggaagatgagctaaaagttttggtt
ggagataagttagcttcagaaatcttaaagatattgaaagaaaagaaaaaattagagagg
aaaaagaaaaaagaaaaagagaaattagagaaagaaaaaaagaaagaagaagctaaggaa
gaacaaccaattatacaacctaaggaagttgaagaaaaagaggaaataaaagctgaagta
gagaaaaaaatagaagaagagaagaaggaagaagagattaaagaaaagatagaggaaaaa
ccaaaggttgaagaagtaaaagaaaaaactaaaaaagagaaaaagaaagagaggaaaaag
aaagaagataaaggtaagcaattaacgttagatgcattcttcaaataa

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