Methanocaldococcus sp. FS406-22: MFS40622_1334
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Entry
MFS40622_1334 CDS
T01175
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mfs
Methanocaldococcus sp. FS406-22
Pathway
mfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MFS40622_1334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfs03019
]
MFS40622_1334
03012 Translation factors [BR:
mfs03012
]
MFS40622_1334
Messenger RNA biogenesis [BR:
mfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MFS40622_1334
Translation factors [BR:
mfs03012
]
Eukaryotic type
Release factors
MFS40622_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
PSV_ORF131-like_dom
HypA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADC70011
UniProt:
D3S597
LinkDB
All DBs
Position
complement(1317709..1318986)
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AA seq
425 aa
AA seq
DB search
MVIVMASTDSKQLYLFKKMLKELKTKKGKGTELISLYIPAGRRISDVAQHLREEMSQASN
IKSKSTRKNVQSAIEAILQRLKLLKEPLEKGVVIFAGMVPRSGPGTEKMETYVIEPPEPI
KTYIYRCDSEFYLEPLEEFLEDKDVYGIILVDRNEATIALVKGRNINILKKLTSGVPGKF
KAGGQSARRLERLIDLAAHEFLQRVGQKANEQFLPLLQEKKLRGILVGGPGHTKNEFVEG
DYLHHELKKIVLDTFDLCYTEEFGIRELLEKAAPLLKDVELMKERQAVQRFLKELIKEDG
GLACYGEKEVLEALMMGAVDTLIVSEELEKYKVKIACNNCDYLEEKTVTKLELIKLEEEL
KNAQCPKCGGALSIVEEKDYIEYLSELCEQSGAKLITVSSETEEGAMILNAFKGIAAILR
YKIHQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgatagttatggcatcaactgattcaaaacaactatatttatttaaaaagatgtta
aaagaactaaaaacaaagaaaggtaaaggaactgaacttattagcctttatattccagct
ggtagaagaatatctgatgtggctcagcatttaagggaagagatgtcacaggcgtcaaac
attaaaagtaaaagcacaagaaaaaatgttcaatcagcaatagaggcaattttacagaga
ttaaagctattaaaagaacctttagagaaaggagttgttatatttgctggaatggttcca
agaagtgggccgggaacagaaaaaatggagacctatgttatagagccaccagaaccaata
aaaacatacatctataggtgtgattcagaattttatttagaaccattagaagagttttta
gaggataaagatgtttatggaataatattggttgatagaaacgaggcaacaatagcgtta
gttaaaggaagaaacataaatatcttaaaaaaactaacaagtggggttcctggaaagttt
aaggcaggagggcagtcagcaagaagattagaaaggcttatagatttagccgctcatgag
ttcttgcagagagtagggcaaaaagctaatgaacaattccttccattattgcaagagaaa
aaacttagaggaattttagttggagggccaggccacactaaaaacgagtttgttgaagga
gattacttacaccatgaacttaagaagattgtattggatacatttgatttgtgctataca
gaagagtttggtataagagagcttttagagaaggcagccccattattgaaggatgttgag
ttgatgaaagaaagacaggctgttcaaagatttttaaaggaattaattaaggaagatgga
ggattggcatgctatggagaaaaagaggttttagaagctttaatgatgggagctgtcgat
actttaattgtttctgaagaattagaaaaatataaggtaaagatagcatgtaacaactgt
gattatttagaggagaaaacagttacaaaactcgaacttatcaaattagaggaggagctt
aaaaatgctcaatgtccaaaatgtggaggggctttaagtattgttgaagaaaaagattat
attgaatatctttcagaattatgtgagcagagtggagctaaacttataacagtttcgtca
gaaacagaagaaggggctatgattttaaatgcatttaagggaatagctgctatattgaga
tacaagattcatcaataa
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