Methanocaldococcus sp. FS406-22: MFS40622_1394
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Entry
MFS40622_1394 CDS
T01175
Name
(GenBank) Transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
mfs
Methanocaldococcus sp. FS406-22
Pathway
mfs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MFS40622_1394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfs03021
]
MFS40622_1394
Transcription machinery [BR:
mfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MFS40622_1394
Prokaryotic type
Archaeal type
TFB
MFS40622_1394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Lar_restr_allev
BRF2-like_C_cyclin_rpt
HTH_AsnC-type
Zn_ribbon_3
TMIE
HTH_Tnp_ISL3
Cyclin_C
RPA_interact_C
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
ADC70070
UniProt:
D3S5F6
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All DBs
Position
1368812..1369816
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AA seq
334 aa
AA seq
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MEALKTKENEKTKEKKIITKAETSEKKEENVREEEIVCPICGSKEVVKDYERAEIVCAKC
GCVIKEKLFDIGPEWRAFDHEQKIKRCRVGAPMTYTIHDKGLSTVIDWRNKDSYGKDLSA
NKRAQLYRLRKWQRRIRVSDAAERNLAFALSELDRITSKLGLPRHVRENAAIIYRGAVDK
GLIRGRSIEGVVAAAIYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLARELNIKLTP
TNPIDYVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCR
RTQREVAEVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaagctctcaaaacaaaagaaaatgaaaaaacaaaagaaaagaaaattataacaaaa
gccgaaacttccgaaaaaaaagaagaaaatgttagggaagaagaaattgtttgtccaatt
tgtggtagtaaagaagttgttaaagattatgaaagagctgaaattgtctgtgcaaaatgt
ggatgtgtcattaaagagaagttatttgatattgggccagagtggagagcatttgaccat
gaacagaaaattaagagatgtagagttggggctcctatgacgtacactatccacgacaaa
ggattatcaacagttattgattggagaaataaagatagctatggaaaagatttatctgca
aataaaagagctcaactttacagattaagaaagtggcagaggagaattagagttagtgac
gctgcagaaaggaatttagcatttgctttatcagaattagatagaattacatcaaaactt
ggattgccaagacatgttagggagaatgccgctataatttacagaggagcagttgataaa
ggattaataagaggaagaagtattgagggggttgttgctgctgctatttatgcagcttgt
agaaggtgtagagtgccaagaactttagatgagattgccgaggcttcaagagtagatagg
aaagaaattggaagaacttacagatttttagcaagagaattaaatataaagctaactcca
acaaatccaatcgattatgtgccaagatttgcttctgaacttggattacctggagaggtt
gagtccaaagctatacagatattacagcaagcggctgaaaagggattaacaagcggtaga
ggccctactggtgttgctgctgcagcaatatatatagcaagcgttctccttggatgtagg
agaactcagagggaagttgctgaagttgctggtgtaacagaggtaactataagaaataga
tataaggagctaacagaacacttagatattgatgtaactttgtaa
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