Methanocaldococcus sp. FS406-22: MFS40622_1566
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Entry
MFS40622_1566 CDS
T01175
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfs03016
]
MFS40622_1566
Enzymes [BR:
mfs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MFS40622_1566
Transfer RNA biogenesis [BR:
mfs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFS40622_1566
Prokaryotic type
MFS40622_1566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADC70238
UniProt:
D3S5X4
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All DBs
Position
complement(1528209..1529510)
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AA seq
433 aa
AA seq
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MYFLIQQRKKESEKNLKEKLKRYRKKLRDSRIKEKLKEMPLNMNKYLTDAYTGGIIKKYP
EDFIVEEITPEGIILEVGKSIEFKDVENWKGNYIHFTLEKRNWTTLDAIREIANRVGKQR
KHFGFAGNKDKYAVTTQRVGCFNVRLEDLKKVKIKGITLRDFQKTNKKIRLGDLWGNRFT
IRVREPELKGEELKKALDELCKLKYFLNYYGVQRFGTTRPITHIVGRFIIERDWEAAFHA
YCGTPLPYDDKKSKLARELVDEENFKEAYKKFPKVFFYERRMIKAYIETGSYQKAFMILP
PYLRCMFINAYQSYLFNEIINRRFEYGFEPMEGDILIDNVPSGALFGYKTRFANGIQGEI
EREIYEKEGLSPEDFKIGEFGSFIGDRRAMIGKIYNMKYWIEDDSYVLQFCLKKGNYATS
VLREFIEKKDKYF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtactttttgattcagcagagaaagaaagaaagtgaaaaaaatttgaaagaaaaatta
aaaagatatagaaaaaaattaagagacagcagaattaaagaaaagctaaaagagatgcca
ttaaacatgaataaatatttaactgatgcatatactggaggaattataaaaaaatatcca
gaggattttattgttgaggagataactccagaaggcattatcttagaggttggaaaaagc
atagaatttaaagatgtggaaaactggaagggaaattatatacacttcaccttagagaag
aggaattggactaccttagatgcaattagagagattgctaatagagttggaaagcaaaga
aaacactttggttttgctggaaataaggataaatatgctgtaacaactcaaagagttggc
tgttttaatgtaaggttagaggatttaaagaaggttaagattaaaggaattacattaaga
gatttccaaaaaacaaataaaaaaataagattgggagatttgtgggggaatagatttact
ataagagttagagaaccagaacttaaaggagaagagctgaaaaaagctttagatgaatta
tgcaagctaaaatatttcttaaactactatggagttcaaagatttggaactacaagacca
ataactcacatagttggaaggtttattatagagagggattgggaagcggcttttcatgca
tattgcggaactcctcttccctacgatgacaaaaaatcaaaattagcaagggaattggtg
gatgaagaaaactttaaagaagcatataaaaaattcccaaaggtatttttctatgaaaga
agaatgattaaagcttatatagagactgggagctatcaaaaggcatttatgattcttcca
ccatatttaagatgtatgtttataaatgcttatcaatcttatctatttaatgagataatc
aatagaaggtttgaatatggctttgaacctatggaaggagatattttaattgataacgtg
ccaagtggggcattatttggctacaaaacaagatttgctaatggcattcaaggagagatt
gagagagaaatttatgaaaaagagggcttaagcccagaagatttcaagattggagagttt
ggttcatttattggagatagaagggcaatgattggaaaaatatacaatatgaaatattgg
attgaagatgatagctatgttttgcagttttgtttaaagaaggggaattatgcaacctct
gttttgagggagtttattgagaagaaggataaatacttttaa
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