Methanocaldococcus sp. FS406-22: MFS40622_1659
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Entry
MFS40622_1659 CDS
T01175
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mfs
Methanocaldococcus sp. FS406-22
Pathway
mfs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MFS40622_1659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfs03021
]
MFS40622_1659
Enzymes [BR:
mfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFS40622_1659
Transcription machinery [BR:
mfs03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MFS40622_1659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
KIX
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
ADC70330
UniProt:
D3S666
LinkDB
All DBs
Position
1612117..1614792
Genome browser
AA seq
891 aa
AA seq
DB search
MLMERYDIPKEIGEIMFGLLSPDYIRKMSVAKIVTPDTYDEDGYPIDGGLMDTRLGVIDP
GLVCKTCGGRIGECPGHFGHIELAKPVIHIGFAKTIYKILKAVCPHCGRVAISEAKRREI
LEKMKKLERDGGNKWEVCEEVYKEASKVTICPYCGEIKYDIKFEKPTTYYRIDGNEEKTL
TPSDVREILEKIPDEDCILLGLNPEVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDL
THKLVDIIRINNRLEENIEGGAPNLIIEDLWNLLQYHVNTYFDNEAPGIPPAKHRSGRPL
KTLAQRLKGKEGRFRYNLAGKRVNFSSRTVISPDPCLSINEVGVPEVVAKELTVPEKVTK
YNIERIRQLLRNGSEKHPGVNYVIRKMVGRDGTEQEFKVKITESNKDFWAENIKEGDIVE
RHLMDGDIVLYNRQPSLHRMSIMAHRVRVLPYRTFRHNLCVCPPYNADFDGDEMNLHVPQ
SEEARAEAEALMLVEKHILSPRFGGPIIGAIHDFISGAYLLTSNYFTKDEATLILRSGGI
KDELWEPDKVENGVPLYSGKKIFSKALPKGLNLRYKAKICRKCDECKKEDCPYDAYVVIK
DGELIKGVIDKNGYGAEAGLILHTIVKEFGPEAGRKFLDSATKMAIRAVMLRGFTTGIDD
EDLPEEALKEIEKVLDEAEEKVKEIIEKYERGELELLPGLNLEESREAYISNVLREARDK
AGAIAERYLGLDNHAVIMAVTGARGNILNLTQMAACLGQQSVRGKRIFRGYRGRVLPHFE
KGDLGAKSHGFVRSSYKKGLSPTEFFFHAMGGREGLVDQAVRTAQSGYMQRRLINALQDL
KTEFDGTVRDSRGIMIQFKYGEDGIDPMLADRGKAVNIDRIIDKVKMKYNK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgttgatggagaggtatgatatcccaaaagaaattggagaaataatgtttggtttgtta
tctcctgattacataagaaagatgtcagtggctaagatagttacaccagatacctatgat
gaggatggttatccaatagatggaggtttaatggacacaagattaggggttatagaccct
ggtttagtttgtaaaacatgtggaggaagaattggagaatgtccagggcattttggacat
atagagttagctaaaccagtaattcatataggatttgccaaaacaatatacaagatattg
aaggcagtttgtccacactgtggaagagtagcaataagtgaagctaaaagaagagagatt
ttagaaaagatgaaaaagttggagagagacggtggaaacaagtgggaggtttgtgaagaa
gtttataaagaggcttcaaaagttacgatctgtccatactgtggggagattaaatatgat
ataaagtttgagaagcctacaacatactatagaattgatggtaatgaagaaaaaacacta
actccatcagacgttagagaaatcttagagaagattccagacgaagattgcatcttatta
ggattaaatccagaggttgcaagaccagagtggatggttctcacagttctaccagttcct
cctgtaacagtaagaccatcaatcaccttagagactggagaaagaagtgaagatgattta
actcacaagttagttgatatcattagaattaacaatagattagaggaaaacattgaagga
ggagcaccaaacttaattattgaggacttgtggaatctcttgcagtatcatgttaacaca
tacttcgacaacgaagctcctggaatccccccagctaagcacagaagtggaagaccatta
aaaactttagcccaaagattgaaaggtaaagagggaagattcaggtacaacttagctggt
aagagggttaacttctcatcaagaactgtcatctctccagacccatgcttaagtattaat
gaggttggagttccagaggttgtggctaaagagctaactgtcccagagaaggtaacaaaa
tacaacattgagagaattaggcaattattaagaaatggttcagagaaacacccaggggtt
aattatgttataagaaagatggttggtagggatgggacagagcaagaatttaaggttaag
ataactgaaagcaataaagatttctgggcagagaatataaaagaaggagatattgttgaa
agacatttaatggatggagatatcgttttatacaacagacagccatcattgcacagaatg
tctattatggcacatagagttagagtcctcccatacagaacatttagacacaacttgtgt
gtctgtccaccatataacgctgacttcgacggagacgagatgaacttacatgtcccacag
tcagaggaagcaagagcagaggcagaggctttaatgttggtagagaaacatatcctctct
ccaagattcggagggccgattattggagctatacacgactttatctcaggagcttatctc
ttaacttcaaactacttcacaaaagatgaagctaccctaattctaagaagtggaggaata
aaggatgagttatgggagccagataaagtagagaatggagttccgttatattcaggtaag
aagatattcagtaaagcattaccaaaaggattaaacttgaggtataaggcaaagatttgt
agaaagtgtgatgagtgtaagaaagaggactgtccttatgatgcttatgtagtaataaaa
gatggagagctaatcaaaggagttattgataaaaacggttacggggcagaggcaggttta
atcttacacacaatagttaaagaattcggtccagaagctgggaggaagttcttagattca
gctactaagatggcaataagggcagtgatgctaagaggatttacaacaggtattgatgat
gaagatttaccagaagaagcattaaaagagattgaaaaagttttagatgaagcagaagaa
aaagttaaagaaattattgaaaaatatgaaagaggagaacttgaattgcttccaggttta
aacttggaagagtcaagagaggcatatataagcaatgttttaagagaggcaagggataaa
gcaggggcaatcgctgaaagatacttaggtttagacaaccatgcagttatcatggcagtt
actggggcaagagggaatatcttaaacttaacacagatggcggcatgtttagggcagcag
tcagttagaggtaaaaggatctttagaggttatagaggtagagttctcccacacttcgaa
aaaggagatttaggagcaaaatctcacgggtttgttagaagtagttataagaaaggtttg
agtccaacagaattcttcttccacgcaatgggaggtagggaaggattggttgaccaggca
gttagaacagctcagtctggttacatgcagagaagattaattaacgctttacaagactta
aaaacagagtttgatggaacagttagagattcaagaggaattatgattcagtttaaatat
ggagaggatggaattgacccaatgcttgcagatagaggtaaggcagttaatattgacaga
ataattgataaagttaagatgaaatacaacaaataa
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