Mycolicibacterium fortuitum: XA26_13520
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Entry
XA26_13520 CDS
T04105
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XA26_13520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mft03400
]
XA26_13520
Enzymes [BR:
mft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
XA26_13520
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XA26_13520
DNA repair and recombination proteins [BR:
mft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XA26_13520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
DUF7577
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALI25204
UniProt:
A0A0N9X9Q6
LinkDB
All DBs
Position
1394217..1395074
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AA seq
285 aa
AA seq
DB search
MPELPEVEALADHLRRHATGREVTRIDVSALSVLKTFDPPTTALHGQTVTGANRWGKYLG
LEVGPWHLITHLSRAGWLRWSDKLSPTPLKPSGKGPIALRVHLDEGVGFDLTEAGTQKRL
AVWVVADPMAVPQIASLGPDALSLDSAGLAGVLAGNSGRIKTVITDQKVIAGIGNAYSDE
ILHVAKLSPFATAGKLTDAQLGALHDAMISVLTDAVTRSVGQQAATLKGEKRSGLRVHAR
TGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtcgaggcgctggccgatcacctccgccgacatgccacgggc
cgggaggtcacccggatcgacgtgtccgcgttgtcggtgctcaagacgttcgatccgccg
acgacggcgctgcacggccagaccgtgaccggcgcgaaccgctggggcaagtacctcggc
ctcgaggtcggcccctggcacctgatcacgcatctgtcacgggcgggttggttgcggtgg
tcggacaagctgtcgccgacgccgctcaagccgtcgggaaagggcccgatcgccctgcgc
gtgcaccttgacgagggagtcggcttcgacctcaccgaggcgggaacgcagaagcggttg
gcggtgtgggtggtcgccgatcctatggccgtaccgcagatcgcctcactcgggccggac
gcgctgtcgctggactcggccggactggccggcgtgctggcgggcaattccgggcggatc
aagacggtgatcaccgatcagaaggtcatcgccgggatcggcaacgcctacagcgacgag
atcctgcacgtcgccaagttgtctccgttcgccactgccggcaagctgaccgatgctcaa
ctcggcgcgctgcacgacgcgatgatctccgtgctgaccgatgcggtcacgcgttcggtc
gggcagcaggccgcgaccctcaagggggagaagcggtccggcctgcgtgtgcatgcccgc
accggactaccgtgcccggtctgcggggacacggtgcgggaggtgtccttcgccgacaag
tcgttccagtactgcccgacgtgccagaccggcggcaaggtgctggccgaccggcggatg
tcccgcttgctcaagtag
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