Mycolicibacterium fortuitum: XA26_13950
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Entry
XA26_13950 CDS
T04105
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XA26_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mft03021
]
XA26_13950
03400 DNA repair and recombination proteins [BR:
mft03400
]
XA26_13950
Enzymes [BR:
mft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XA26_13950
Transcription machinery [BR:
mft03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XA26_13950
DNA repair and recombination proteins [BR:
mft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XA26_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALI25242
UniProt:
A0A0N9Y321
LinkDB
All DBs
Position
1432687..1436652
Genome browser
AA seq
1321 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMAVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELQDRYGEYFTGAMGAESIKKLIENFDIEAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTTLVEGDKGEYV
PAGKDSPEQGVYSSPAEAIMAMDRGALSVRAKIKVRLTDARPPANIEAALFGSSENGGWK
PGDAWTAETTLGRVLFNELLPKGYPFVNEQMHKKVQARIINDLAERFPMIVVAQTVDKLK
DAGFHWATRSGVTVSMADVLVPPQKQEILERHEAEAEAIERKYQRGALNHNERNESLVKI
WQDATEEVGKALEEYYPADNPIITIVKSGATGNLTQTRTLAGMKGLVTNPKGEFIPRPIK
SSFREGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGI
IVTLAERGPDGSLIRDAHVETSAFARTLATDAVDDKGNVVIERGHDLGDPAIDALLAAGV
SQVKVRSVLTCASAAGVCAKCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQ
GGVTGGADIVGGLPRVQELFEARIPRNKAPIADVAGRVRLEESDKFFKITIVPDDGGEEV
VYDKLSKRQRLRVITHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLV
KEVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETENRRVVA
EGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIG
KLIPAGTGIARYRDIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDY
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggcctcgccaccgcggacgacatc
cgtaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cctgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcaccc
gtcacgcacatctggtacttcaagggtgtgccgtcgcggttgggctacctgctcgacctg
gctccgaaggatctggaaaagatcatctacttcgcggcctacgtgatcacctcggtcgac
gacgagatgcgccacaacgagctgtccacgctcgaggccgagatggccgtcgagcgcaag
gccgtcgaggatcagcgcgacgccgacctggaagcccgggcccagaagctcgaggccgac
ctggccgagctcgaagccgaaggtgccaagtccgacgtgcgccgcaaggtgcgcgacggt
ggagagcgtgagatgcgtcagctccgcgaccgcgcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgaggtgctg
taccgcgagctgcaggaccgctacggcgagtacttcaccggtgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagagcctgcgcgagacc
atccgcagcggcaagggtcagaagaagctgcgcgccctcaagcgcctcaaggtcgtcgcg
gccttccagcagtcgggcaactccccgctgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggtcgtcgcggccgtccggtcaccgggccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctgggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctcatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
ccccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctcctacgctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggtaagccgctggccatgccgcgtctggac
atggtgaccggtctgtacttcctgaccaccctcgtcgagggggacaagggtgagtacgtg
ccggccggcaaggattcgccggagcagggtgtgtacagcagcccggccgaggccatcatg
gctatggaccgcggtgcgctgtcggtgcgcgccaagatcaaggtgcggctgaccgatgcg
cgtccgccggccaacatcgaggctgcacttttcggctcctccgagaacggtggctggaag
ccgggcgatgcctggaccgcggagaccacgctgggccgggtgctcttcaacgagctgctg
cccaagggctacccgttcgtcaacgagcagatgcacaagaaggtccaggccaggatcatc
aacgatctggccgagcgcttcccgatgatcgtggtggcgcagaccgtcgacaagctcaag
gacgccggtttccactgggccacccgttcgggtgtcacggtctcgatggccgacgttctg
gtgccgccgcagaagcaggagatcctggagcggcacgaggccgaggccgaggcgatcgag
cgcaagtaccagcgcggcgcgctgaaccacaacgagcgcaacgagtccctggtcaagatc
tggcaggacgccaccgaagaggtgggtaaggcgctggaggagtactacccggctgacaac
ccgatcatcacgatcgtgaagtccggcgccacgggtaacctcacccagacgcgcaccctg
gcaggcatgaagggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaag
tcctcgttccgtgagggcctgacggtgttggagtacttcatcaacacccacggtgctcgt
aagggtctggccgacaccgctctgcgtaccgccgactcgggttacctgacccgtcgcctg
gtggacgtgtcgcaggacgtcatcgttcgcgagaccgactgtgagaccgagcgcggcatc
atcgtcacgctggccgagcgcggcccggatggttcgctgatccgcgatgcgcacgtcgag
acctcggcgttcgctcgcacgctggccaccgacgctgtcgacgacaagggcaacgttgtc
atcgagcgcggccatgacctgggcgacccggccatcgacgcgctgctggctgccggtgtc
tcgcaggtgaaggtccgctccgtgctgacctgcgcctcggccgccggtgtgtgtgccaag
tgctacggccgttcgatggccaccggcaagctggtcgacatcggcgaggccgtcggcatc
gtcgccgcccagtccatcggtgagcccggtacccagctgaccatgcgtaccttccaccag
ggtggtgttaccggtggcgccgacatcgtcggtggtctgcctcgtgtccaggagctgttc
gaggcccgtattccgcggaacaaggcgcccatcgccgatgtcgcgggccgggtccggctg
gaggagagcgacaagttcttcaagatcaccatcgttcccgacgatggcggcgaggaagtt
gtctacgacaagctctccaagcgtcagcgcctgcgcgtgatcacccacgaggacggctcc
gaaggcgtgctgtccgacggtgaccacgtcgaggtcggcgaccagctgatggaaggctcc
gcggatccgcacgaggtgctgcgtgtccagggcccccgcgaggtgcagatccacctcgtc
aaggaggtccaggaggtctaccgggcccagggcgtgtcgatccacgacaagcacatcgag
gtcatcgtccggcagatgctgcgtcgcgtcacgatcatcgattcgggtgccacggagttc
ctgcccggctcgctcaccgagcgtgccgagttcgagaccgagaaccgtcgcgtcgtggcc
gagggcggcgagcccgcggccggccgcccggtgctgatgggtatcaccaaggcatcgctg
gccacggactcgtggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgat
gcggcgatcaactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggt
aagttgatcccggccggtaccggcatcgcccgttaccgcgacatccaggtgcagccgacc
gaagaggcccgcgctgcggcgtacacgatcccgtcctacgaggatcagtactacagcccg
gacttcggccaggccaccggtgctgcggtgccgctggacgattacggatactcggattac
cgctag
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