Mycolicibacterium fortuitum: XA26_23960
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Entry
XA26_23960 CDS
T04105
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XA26_23960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mft03400
]
XA26_23960
Enzymes [BR:
mft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
XA26_23960
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XA26_23960
DNA repair and recombination proteins [BR:
mft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XA26_23960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
TackOD1
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALI26239
UniProt:
A0A0N7H8H5
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All DBs
Position
2423498..2424283
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AA seq
261 aa
AA seq
DB search
MHHPRAVRRHDAGPADLTARLLGARITGTGRRGKYLWLTLAEEDGQAETEALVVHLGMSG
QMLLGPLRDDRHLRIAALLDDGTALSFVDQRTFGGWQLAELVTVDGTAVPQPVAHVARDP
LDPRFDRDHVVNVLRHKHSEIKRQLLDQTVVSGIGNIYADEALWRTKVNGARTAALLTRR
KLGELLDAAAEVMTDALGQGGTSFDSLYVNVNGESGYFERSLDAYGREGEPCRRCGAIMR
RDKFMNRSSFYCPKCQPRPRG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccatccgcgtgccgtgcgtcgccatgatgccggcccggccgatctgactgcccgt
ctgctgggggcccgcatcaccggcaccggacgccgcggcaagtacctgtggttgacgttg
gccgaagaggacggccaagccgagaccgaagcgttggtggtgcatctggggatgagcggt
cagatgctgttgggcccgcttcgcgatgaccggcatctgaggatcgcagcactgctagac
gacggcacggccctgagctttgtcgaccagcgcacgttcggagggtggcagctggccgaa
ttggtgacggtggacggcaccgccgtgccgcaaccggtcgcgcacgtcgcccgcgatccg
ctggatccccgtttcgatcgtgaccacgtagtgaacgtgttgcggcacaagcactctgag
atcaagcgccaactgctcgaccagactgtggtatcgggtatcggcaacatctacgccgac
gaggcgctgtggcggaccaaggtcaacggcgccaggactgctgcgctgctgacccgccgc
aagctcggtgagctactcgatgccgccgccgaggtgatgaccgacgcgctgggccagggc
ggcacgtcgttcgactcgttgtatgtgaacgtcaacggtgaatccggttatttcgaacgg
tctttggatgcctacggccgtgaaggggagccgtgccgacggtgcggcgcgatcatgcgt
cgcgacaagttcatgaaccggtcgtcgttctattgtccgaagtgtcagccccgtccccgg
ggctga
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