Mycolicibacterium fortuitum: XA26_25990
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Entry
XA26_25990 CDS
T04105
Name
(GenBank) Ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XA26_25990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mft03019
]
XA26_25990
Messenger RNA biogenesis [BR:
mft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XA26_25990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALI26442
UniProt:
A0A0N9Y5M2
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All DBs
Position
2625740..2627416
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AA seq
558 aa
AA seq
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MSTELAPPKPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPGHDEPGVDLI
LPDLRHVEDRLEDVEALVVTHAHEDHIGAIPYLLKLRPDIPVVGSKFTIALIREKCREHR
IKPVFVEVAERQSSQHGVFECEYFAVNHSIPGCLAVAIHTGAGTVLHTGDIKLDQQPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVSPSESEVGPTLHRLIRGAEGRVIVACFAS
NVDRVQQIVDAAVALGRRVSFVGRSMVRNMGIARELGYLRVADSDILDIGAAEMMPAEKV
VLITTGTQGEPMAALSRMSRGEHRSITLTAGDLIILSSSLIPGNEEAVYGVIDALAKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRHMRANAALAASTGVPQENI
VLAENGVSVDLVAGKASISGAVPVGKMFVDGLITGDVGDATLGERLILSSGFVAVTVVIH
RETGKPAGPAHLHSRGFSEDPKALEPAARNVERELESLAADNITDPARIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgaactcgcgcctcccaagcccttggcccccggcggtctgcgagttaccgcc
ctgggcggaatcagtgaaatcggccgcaacatgacggtcttcgagcacctgggcaggttg
ctcatcgtggactgcggcgtgctttttcccggacacgacgaacccggcgtcgacctgatc
ctgccggacctgcggcacgtcgaggaccgtctcgaggacgtcgaagcgctcgtcgtcacc
cacgcgcacgaggaccacatcggggccattccgtacctgctcaaactgcgcccggacatc
ccggtggtcggttcgaagttcaccatcgccctgatccgggagaagtgccgtgaacaccgg
atcaagccggtgttcgtcgaggtcgccgaacggcagagcagccagcacggcgtgttcgaa
tgcgagtacttcgcggtgaaccactcgattcccggctgtctggccgtcgcgatccacacc
ggcgcaggcactgtgctgcacaccggtgacattaaactcgatcagcagccgctcgatggg
cgtccgaccgacctgccgggaatgtcacggctcggcgatgccggtgtcgacctgttcctt
tgtgactcgaccaattccgagcatccgggagtcagcccgtcagagagcgaggtcggcccg
acgctgcaccggctgatccgcggtgccgagggtcgcgtgatcgtggcgtgcttcgcctcg
aacgtcgatcgcgtgcagcagatcgtcgacgccgcggtggcactgggccgacgcgtttcg
ttcgtcggacgctcgatggtgcgcaacatgggcatcgcccgcgaactcggctacctgcgc
gtcgcggattccgacatcctcgacatcggcgcggccgagatgatgccggccgagaaggtc
gtgctgatcaccaccggcacccagggcgagccgatggcggcactgtcgcggatgtcacgc
ggcgagcatcgcagcatcacgctgactgccggtgacctcatcatcctgtcctcgtcgttg
atcccgggcaatgaggaagcggtctacggggtcatcgacgcgctggccaagatcggcgcc
cgcgtcgtcaccaacgcccaagcgcgcgttcacgtttccggtcacgcctatgcgggtgag
ctgctgttcctctacaacggggtgcggccccgcaacgtgatgccggtgcacggaacctgg
cgtcacatgcgggccaacgcggcgctggccgcgagcaccggggttccgcaggagaacatc
gtgctggccgagaacggtgtgagcgtggacctcgtcgcgggtaaggcgtcgatctcgggt
gcggtgccggtcggcaagatgttcgtcgacgggttgatcaccggggatgtcggtgacgcg
acgctcggcgaacgcctcatcctgtcttcgggtttcgtggcggtgacggtggtcatccac
cgcgagaccggaaagcctgccgggccggctcatctgcattcgcgcgggttctcggaggat
ccgaaagcgctggaaccggccgcccgcaacgtcgagcgcgagttggaaagccttgcggcc
gacaacatcaccgatccggcccgcatcgcgcaggcggttcgccgcacggtgggcaaatgg
gtgggcgagacctaccgacgtcagccgatgatcgtccccacagtcatcgagatctag
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