Mycolicibacterium fortuitum: XA26_44600
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Entry
XA26_44600 CDS
T04105
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mft
Mycolicibacterium fortuitum
Pathway
mft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XA26_44600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mft03019
]
XA26_44600
03009 Ribosome biogenesis [BR:
mft03009
]
XA26_44600
Enzymes [BR:
mft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XA26_44600
Messenger RNA biogenesis [BR:
mft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XA26_44600
Ribosome biogenesis [BR:
mft03009
]
Prokaryotic type
rRNA helicases
XA26_44600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
HEM4
Flavi_DEAD
Surface-like_ins_dom
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALI28260
UniProt:
A0A0N9XMX0
LinkDB
All DBs
Position
complement(4575488..4577218)
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AA seq
576 aa
AA seq
DB search
MTSPDPDSGDTAPTFADLQIDPAVLKAVTDVGYESPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTSSRKTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGA
SYTVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLSNLDYLVLDEADEMLTMGFAEEVERI
LADTPEYKQVALFSATMPPAIRKITTKYLHDPVEVTVKAKTATAENITQRFIQVAGARKL
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLRSRGFAAAAINGDINQAQRERTITALKD
GTIDILIATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGHALLFVTPRE
RHLLKSIEKHTRSKVIEAELPSVDDVNAQRVAKFRDSITDSLNSDGLELFRRLIEDYERE
NDVPMADIAAALALQSRNGEEFLMTEPPPEKRRERDRDDRGERAPRKERPPREGLATYRI
SVGKRHKVGPGHIVGAIANEGGLHRNEFGHITIRGDYSLVELPEKLPGKTLKALENTRIS
GMLINLTPERGPRRDHKDKDHKDRSGYRGKPHRKTK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccagacccggattcgggggataccgccccgacgtttgccgacctgcagatt
gatcctgcggtgttgaaggcagtcactgatgtcggctacgaatcgccttcggcgatccag
gccgcgaccattccggcgatgctcgcgggctccgacgtggtcggtctggcccagaccggc
accggcaagacagccgcgttcgccatcccgatcctgtccaagatcgacacctccagccgc
aagacccaggcgctggtgctggcccccacccgtgagctggctctgcaggtcgccgaggca
ttcggccgttacggcgcacatctgcccgagatcaacgtgctgccgatctacggcggcgcg
tcctacacggtgcagttgtccggtctccgtcgcggcgcccaggtcgtggtgggcacgccg
ggccgcgtgatcgaccacctcgagcgcggcacgctggatctgtcgaaccttgactacctc
gtgctcgacgaggccgacgaaatgctcaccatgggcttcgccgaagaggtcgagcgcatc
ctcgccgacacccccgagtacaagcaggtggcgctgttctcggccaccatgcccccggcc
atccgcaagatcaccaccaagtacctgcacgatccggtggaggtcacggtcaaggccaag
accgccaccgcggagaacatcacccagcggttcatccaggtcgccggtgcgcgcaagctg
gacgcgttgacgcgggtgctcgaggtcgaagagggcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtggccgagcggctgaggtcccgcggtttcgcggcggcg
gctatcaacggtgacatcaaccaggctcagcgcgagcgcaccatcaccgcgctcaaggac
ggcaccatcgacatcctgatcgccaccgacgtcgccgcccgcggtttggacgtcgaacgc
atcagccatgtcgtcaactacgacatcccgcacgacaccgagtcctatgtgcatcgcatc
gggcgcaccggccgggccgggcgttccgggcatgcgctgctgttcgtcaccccgcgcgaa
cgccacctgctcaagtccatcgagaagcacacccggtccaaggtcatcgaggccgagctg
cccagcgtcgacgacgtcaacgcgcagcgggtggcgaagttccgtgactcgatcaccgac
tcgctcaacagcgacgggctcgagctgttccgcaggttgatcgaggactacgagcgcgag
aacgacgtgccgatggccgatatcgccgcggcgctggcgctgcagtcgcgcaacggcgaa
gagttcctgatgacggagccgccgccggagaagcgccgtgaacgcgaccgcgacgatcgg
ggcgagcgggctccgcgcaaggagcggccgccgcgcgaaggccttgccacctaccggatc
tcggtgggcaagcggcacaaggtgggtccgggccatattgtcggtgccatcgccaacgag
ggtggcctgcaccgcaacgagttcggccacatcacgatccgcggcgactactcgttggtg
gagctcccggagaagctgcctggcaagacactcaaagccttggagaacacccggatctcg
ggcatgttgatcaatctgacgcccgagcgtgggccgcgtcgtgatcacaaggacaaggac
cacaaggaccggtctggataccgggggaagccgcaccggaagaccaagtga
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