Mycolicibacterium fortuitum: XA26_59650
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Entry
XA26_59650 CDS
T04105
Symbol
hprA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mft
Mycolicibacterium fortuitum
Brite
KEGG Orthology (KO) [BR:
mft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mft03019
]
XA26_59650 (hprA)
Enzymes [BR:
mft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
XA26_59650 (hprA)
Messenger RNA biogenesis [BR:
mft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XA26_59650 (hprA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
NACHT
nSTAND3
NNH7
ABC_tran
PhoH
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALI29748
UniProt:
A0A0N9YIP0
LinkDB
All DBs
Position
complement(6109092..6112973)
Genome browser
AA seq
1293 aa
AA seq
DB search
MSEPSVAELRSRLDGLTIRDADRLRRRLRNLRGGDTAKIAEHIATAEGLVLTRQAAVPAI
TYPDLPVSEHRDELAKAISENQVVVVAGATGSGKTTQLPKICLDLGRGIRGTIGHTQPRR
LAARTVAQRIADELGTPLGEAVGYTVRFTDQASDSTLIKLMTDGILLAEIQRDRRLLRYD
TLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFAAHFHDAPIVEVSGR
TYPVEIRYRPLEVPAPPSEDDDPDDPDHEIVRTEVRDPTEAIVDAVRELESEPPGDVLVF
LSGEREIRDTAEALKDLRNTEVLPLYARLPTAEQQKVFQPSHSGRRIVLATNVAETSLTV
PGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTAPGVCIRLYSEEDF
ESRPRYTDPEILRTNLAAVILQMAALQLGDIAEFPFLDPPDARSIRDGVQLLQELGAFDT
AGALTDVGRRLARLPLDPRVGRMILQADTEGCVREVLVLAAALSIPDPRERPSDKEEAAR
QKHARFADEHSDFISYLNLWNYLREQRNQRSGNAFRRRCREEFLHYLRIREWQDLTGQLR
SIARDIGIRESDEAAEPASIHAALTAGLLSHVGLREGEGRDYQGARNSKFVLAPGSVLTK
KPPRWIVVADLVETSRLFGRIAAKVEPEAVERVAGHLVQRTYSEPHWEARRGEVVAYERV
TLYGLPLVPRRKVGYAKIEPETSRELFIRHALVEGDWQTRHHFFRDNARLRAELEEIEER
ARRRDLLVGDDDIYALYDARIPSGIVSARHFDAWWKKQRHKTPDLLTFTRDDLLRSEDGA
DNPDTWQTGDLELPLTYRFEPGAADDGVTVHVPVGVLARLGGDGFAWQVPALREELVTAL
IKSLPKDLRRNFVPAPDTARAILGDIDPSSGSLLDEVQRELRRRSGILVPIDAFDLSKIP
DHLRMTFAVETADGKEVARGKDIDALREQLAVPVAQAVADALGGDLDRTGLKTWPEDLDE
LPRTVESVSGGHTVRGYPAFVDNGNSVDIKVFANPAEQAAAMRPGLRRLLRLSVPSPVKA
IERGLSTRTRLALNANPDGTLAALLEDCADAAADVLVPKPVWTKAAFGELVRRAGKELGP
TTQAGVNRVEKVLAGAHEVQVALPDKPSPAQADAVADIRSQLDRLLPKGFVTAAGIARLN
DLARYVTAIARRLERLPQALGADRDRMSRVHAVEDAYDELFQALSPGRAAADDIRDIAWQ
IEELRVSLWAQQLGTPRPVSEQRIYKAIDAAAR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaccgtcagtcgctgagctgcgctcccgcctcgacggtttgacgatccgcgac
gccgaccggttgcgccgtcggctccggaatctccgcggtggtgacaccgccaagatcgcc
gaacacatcgcgaccgcggaaggcctcgtgctcacccgccaggccgctgtcccggccatc
acctaccccgacctgccggtcagtgagcaccgcgacgagctggccaaggccatcagcgag
aaccaggtggtcgtggttgccggcgcgacgggttcgggcaagaccacccagctgccgaag
atctgcctggacctcggccgcggtatccgtggaaccatcggccacacccagccccgccgg
ctggcggcacgcaccgtcgcgcagcgcatcgcggatgaactcgggaccccgctcggggag
gcggtcggttacacggtgcgcttcaccgatcaggccagtgactcgacgctgatcaagctg
atgaccgacggcattctgctcgccgaaattcaaagggaccgccggctgctgcgttacgac
acgctgattctcgatgaggcgcacgagcgcagcctcaacatcgacttcctgctgggctac
ctgcgtgagctgttgccgcgccgccccgatctcaaggtcatcgtcacgtccgccaccatt
gagccggagcggttcgcggctcacttccatgacgcgccgatcgtggaggtgtcggggcgc
acgtacccggttgagatccggtaccggccccttgaagtcccggcaccaccctcagaggac
gacgatcccgacgaccccgatcacgagatcgtgcgcaccgaggtcagggatccgaccgag
gccatcgtcgacgcggtccgcgagcttgaatctgagccacctggtgatgtgctggtgttc
ctgtcgggcgagcgagaaatccgggacaccgcagaggctttgaaggacctccggaacacc
gaggtgttgccgctgtatgcccgcctgcctaccgccgagcagcagaaggtatttcagccc
agccacagtggccggcgaatcgtactggccaccaacgtcgccgagacctcactcacggtg
cccggcatccgctacgtcgtcgacccgggtaccgcgcggatctcccgctacagccgccgc
accaaggtgcagcggctgccgatcgagccgatctcgcaggcctcggccgcccagcgggcc
ggacgctcgggacgtaccgccccgggtgtgtgcatccggctgtactcggaggaagacttc
gaatcccggccccgctacaccgatccggagatcctgcggaccaacttggccgcggtcatc
ctgcagatggccgccctgcaactcggcgacatcgccgagtttccattcctcgatccgccc
gacgcccgcagcatccgcgacggggtccagctgctgcaggaactcggcgccttcgatacc
gcgggtgcgttgaccgacgtcggccgccggctggcccggctgccgctggacccgcgcgtc
ggccggatgatcctgcaggccgacaccgagggctgcgtgcgcgaggtactggtgctcgcg
gccgcactgtcgattcccgatccgcgggaacgcccgagcgacaaggaagaggcggctcgg
cagaagcacgcgaggttcgccgacgagcactcggatttcatctcgtacctcaacctctgg
aactaccttcgcgagcaacggaaccagcgctccggcaacgctttccggcgaaggtgccgt
gaggagttcctgcactacctgcggatccgggagtggcaggacctgaccgggcagctgcgc
agcatcgcccgtgacatcggcatccgcgagagtgacgaggccgccgagcctgccagcatc
cacgcggcgctcaccgcgggcctgctctcgcacgtcgggctgcgtgagggcgagggccgc
gactatcaaggcgcccgcaactccaagttcgtgctggcgcccggctcggtgctgaccaag
aagccgccccgctggatcgtggtggccgacctggtcgagaccagtcggctgttcggccgc
atcgcggccaaggtcgaaccggaggcagtcgaacgggtcgccggtcatctggtgcaacgc
acctacagcgagccgcattgggaggccagacgcggcgaggtggtcgcctacgagcgggtg
acgctgtacggtttgccgctcgttccccgccgcaaggtcggctacgccaagatcgaaccg
gaaaccagccgcgagttgttcatccggcacgcgctggtcgagggggactggcagaccagg
caccacttcttccgcgacaacgcccggctgcgtgctgaactcgaggagatcgaggagcgg
gcccgtcggcgtgacctgctggtcggcgacgacgacatctacgccctctacgacgctcgt
atccccagtggcatcgtctccgcacgccacttcgacgcgtggtggaagaagcagcggcac
aagacacctgacctgctcaccttcacccgtgacgatctgttgcggtcggaagacggcgcg
gacaacccggacacctggcagaccggtgatctcgaactgccgctgacctaccggttcgag
cccggggccgctgatgacggtgtcacggtgcacgtgccggtcggcgtactggcccgcctc
ggcggtgacggcttcgcctggcaggtacccgcgttgcgggaggagctggtcaccgcactg
atcaagtcgctgcccaaggatctgcgccgcaatttcgttcccgctccggacaccgcgcgg
gcaatcctcggggacatcgatccgtcctcgggctcactgctcgacgaggtccaacgcgaa
ctgcgcaggcgcagcggcattctggtgcccatcgacgcgttcgacctgagcaagatcccg
gatcacctgcggatgaccttcgccgtggagacggccgatggcaaagaggtggcccggggc
aaggacatcgatgcgctgcgcgagcagctggccgtgcccgtcgcccaggcggtggccgat
gcgctgggcggggatctggaccgcaccgggctgaaaacctggcccgaggatctcgacgag
ctcccgcgcacggtcgagagcgtcagcggtgggcacacggttcgcgggtacccggccttc
gtggacaacggaaactccgtcgacatcaaagtgttcgccaatccggccgagcaggccgcg
gccatgcgccccggtctacggcggctgctgcgactgtcagtgccgtcaccggtcaaggcg
atcgagcggggcttgagtacccggacccgcctggcgctcaacgccaaccccgacggaacg
ctcgccgcgctgctcgaggactgtgccgacgccgctgccgacgtgctggtaccgaagccg
gtgtggacgaaggcagctttcggcgagctggtacggcgggccggaaaagaactaggtccc
accacacaagccggagtgaatcgggtagagaaagtgctggccggcgcgcacgaggtacag
gtggcgctgcccgacaagccctcgcccgcgcaggccgatgccgtcgccgacatccgatct
caactggatcgcctgttgcccaagggtttcgtgaccgccgcggggatcgcgcggttgaac
gatctggcgcgatatgtcaccgccatcgcgcggcggctggagcggttgccgcaggcgctg
ggcgccgaccgtgatcggatgtcgcgcgtacatgccgtcgaggacgcctatgacgaactg
ttccaggcgctttcaccgggccgggccgcagcggatgacatccgtgacatcgcatggcag
atcgaggagttgcgggtcagcctgtgggctcagcaactcggcacgccacggccggtcagc
gagcagcgcatctacaaggcgatcgacgcagctgcccgatag
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