Corallococcus macrosporus HW-1: LILAB_00925
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Entry
LILAB_00925 CDS
T01558
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfu03000
]
LILAB_00925
Transcription factors [BR:
mfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
LILAB_00925
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_3
GAF_2
AAA_5
GAF
HTH_8
AAA_16
AAA_19
nSTAND3
AAA_22
Mg_chelatase
MCM
AAA
AAA_30
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
AEI62117
UniProt:
F8C9W7
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All DBs
Position
complement(220208..221803)
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AA seq
531 aa
AA seq
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MQDDFSGATDGANDARDLIELATAEGSVGDLLRRGLDWLTRVVRFDLATVFLLKEGRLVS
VAARGPLANAKVRQHTLQLSEFPSLRQALETRRAKAFTEEDHAHGDGDPFDGVLDLPPGH
SCMVVPLCAGERCYGVLSLDRAECETYPQPVVELVEVYGQMLATAIQSAEQRATFERLHR
QDHEHAKLLEAQLGGDSEGILETSRSPVMRDLARRARQVAETDTPVLITGETGTGKERLA
RAIHRWSARADQPFVTLNCAAIPAGLLESELFGHVKGAFTGATKDRAGRFQMAHGGTLLL
DEVGELPFDLQAKLLRALQEKTFEPVGSDKTVRADVRILAATHVDLQQAIAQKRFREDLY
YRLSVFPLRLPPLRERREDLPQLCDFLLEEQARRTGRRGMRVTPEGLTRLAAYDWPGNLR
ELANALERATILTRGTALGPESFDVPTRGAAVVAALPEEPAPAAEGAKRGPVLTLAAVQR
EHIMRVLTLTRGRVYGANGAAALLGLKPSTLQSRMKKLGIARLEQFVVDEA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgacttttcaggcgccacggacggcgcgaacgacgctcgggacctcatcgag
ctggccacggcggagggctccgtcggggatttgctgcgccgtgggctcgactggctgacg
cgggtggtgcgcttcgacctggccacggtgttcctcctcaaggagggccggctggtgtcg
gtggcggcgcgggggccgctggccaacgcgaaggtgcggcagcacacgctgcagctgtcg
gagttcccgtcgctgcggcaggcgctggagacgcggcgggccaaggccttcacggaggag
gaccacgcccacggggatggcgacccgttcgacggcgtgctggacctgccgccggggcac
tcctgcatggtggtgccgctgtgcgcgggcgagcgctgctacggcgtgctgtccctggac
cgggcggagtgtgagacatacccccagccagtggtggagctggtggaggtgtacgggcag
atgctggccacggcgattcagtccgccgagcagcgcgccaccttcgagcggctccaccgg
caggaccacgagcacgcgaagctgctggaggcgcagctcgggggcgactcggagggcatc
ctcgagacgtcgcgcagcccggtgatgcgggacctggcgcggcgggcgcggcaggtggcg
gagacggacacgccggtgctgattaccggagagacgggcacgggcaaggagcggctggcc
cgggccatccaccggtggagcgcccgcgcggaccagcccttcgtcacgctcaactgcgcg
gccatccccgcgggcctgctggagagcgagctcttcggccacgtgaagggcgccttcacc
ggcgccaccaaggaccgggccgggcgcttccagatggcccacggcggcacgctgctgctg
gacgaggtgggcgagctgcccttcgacctccaggcgaagctgctgcgcgcgctgcaggag
aagaccttcgagccggtgggcagcgacaagacggtgcgcgcggacgtgcgcatcctggcg
gccacgcacgtggacctgcagcaggccattgcccagaagcgcttccgcgaggacctctac
taccggctgagcgtgttccccctgcgcctgccgcccttgcgcgagcgccgcgaggacctg
ccgcagctgtgcgacttcctcctggaggagcaggcgcgccggacggggcggcggggcatg
cgggtgacgccggagggcctgacgcggctggcggcctacgactggccgggcaacctgcgc
gagctggccaacgcgctggagcgggccaccatcctcacgcgcgggacggcgctggggccg
gagtccttcgacgtgcccacgcgtggcgcggccgtggtggcggcgctgccggaggagccc
gcgcccgcggcggagggcgcgaagcggggccccgtgctgacgctggcggcggtgcagcgc
gagcacatcatgcgggtgctcacgctgacccggggccgcgtgtacggcgccaacggggcc
gcggcgctgctggggctcaagccgtccacgctccagagccggatgaagaagctgggcatc
gcccggctggagcagttcgtcgtcgacgaggcgtga
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