KEGG   Corallococcus macrosporus HW-1: LILAB_02650
Entry
LILAB_02650       CDS       T01558                                 
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
mfu  Corallococcus macrosporus HW-1
Pathway
mfu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mfu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LILAB_02650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mfu02022]
    LILAB_02650
Two-component system [BR:mfu02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   LILAB_02650
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase HTH_50 AAA_16 IstB_IS21 HTH_28 AAA AAA_22 AAA_3 MCM nSTAND3 Zeta_toxin
Other DBs
NCBI-ProteinID: AEI62455
LinkDB
Position
634649..636001
AA seq 450 aa
MKPGPRILVVDDDSGVLKALRGLLSDEGFTPVEARSTAEATRALDAPEGPPAMMLLDLRM
PGETGLELLARLPRPFATPVVVLSGEASPAEAVQALRLGATDFVEKPPSPERLLTAIRNA
LALGALQEERERLLDALARPGHLVGDSPSMAALRQLIARVGPSDTAILITGETGTGKERV
ARALHLASGRKGRLVAVNCAAIPSTLLESELFGHEKGAFSGALSRRAGRIEQAHGGTLFL
DELGDMPLELQAKLLRVLETKEVERLGGTLPVPVDARVVAATHQDLARAVKEGRFRQDLY
FRLNVMPLQVPPLRERPEDLLPLARAFAAEFAGPQASLVLAPGAEAALRAYPWPGNVREL
RNLIERLNLLRGEGPLTLGPELVSAPRAAAVAARPSLGQKSYREHVEDFERELIRAALQE
GESIAGAARLLQVDRGNLYRRIKALGLPVT
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgaagcccggtccccgcatcctcgtcgtcgatgatgactccggtgtcctcaaggccctg
cgcggcctgttgagcgacgagggcttcacgcccgtggaggcccgctccaccgcggaggcc
acccgggcgctcgacgcgcccgaaggccctccggcgatgatgctgctcgacctgcgcatg
ccgggtgagacggggctcgagttgctcgcgcggctgccccggccatttgccacgcccgtg
gtggtgctgtccggcgaggcctcccccgccgaggccgtgcaggcgctgcggctgggcgcg
acggacttcgtggagaagccgccctcccccgagcgcctgctcaccgcgatacgcaacgcg
ctggcgctgggcgcgctccaggaggagcgcgagcggctgctggacgcgctggcccgcccc
ggccacctggtgggggacagccccagcatggcggcgctgcgccagctcatcgcgcgcgtg
ggccccagcgacaccgccatcctcatcacgggcgagaccggcacgggcaaggagcgcgtc
gcgcgggcgctgcacctcgcgtcggggcgcaagggccggctcgtcgccgtcaactgcgcg
gccatcccctccaccctgctggagagcgagctgttcggccacgagaagggcgccttctcc
ggcgccctgtcccggcgcgcgggccgcatcgagcaggcccacggcggcacgctgttcctc
gacgagctgggcgacatgcccctggagctccaggccaagctgctgcgcgtcctggagacg
aaggaggtggagcggctgggcggcaccctgcccgtgccggtggacgcgcgcgtcgtcgcg
gccacgcaccaggacctcgcccgcgcggtgaaggagggccgcttccggcaggacctctac
ttccgcctcaacgtgatgccgctccaggtgccgcccctgcgcgagcgcccggaggacctg
ctccccctggcgcgcgccttcgcggccgagttcgccggtccccaggcctccctcgtgctc
gcccccggcgcggaggccgcgctccgcgcctatccgtggccgggcaacgtgcgcgagctg
cgcaacctcatcgagcgcctcaacctgctccggggcgagggcccgctcacgctcgggccg
gagctcgtctccgcgccgcgggccgccgccgtggccgcccgcccctccctgggccagaag
agctaccgcgagcatgtggaggattttgaacgcgagctgatccgcgcggcgctccaggaa
ggcgagagcatcgccggcgccgcgcggctgctgcaggtggaccggggcaacctctaccgg
cgcatcaaggccctgggactccccgtcacctga

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