Corallococcus macrosporus HW-1: LILAB_05105
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Entry
LILAB_05105 CDS
T01558
Name
(GenBank) putative RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfu03021
]
LILAB_05105
Transcription machinery [BR:
mfu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LILAB_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
RapA_C
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEI62942
UniProt:
F8CPR9
LinkDB
All DBs
Position
complement(1222180..1225224)
Genome browser
AA seq
1014 aa
AA seq
DB search
MSLVEGSKVRYLPQPEWGVGHLLSLHEEGAKALVVFPAREDAPVLVSTKGGALVQYPLPP
GEPVITYKGRLALVVREEPGARGLRRYVLRYAENDEEDELPESSLRALPPRSDLLSTLRE
GRVGDARAFALRKQALMLDDERRCDALGALLASRIMVKPHQVGVVQRVLSASRPRFVLAD
EVGLGKTIEAGMVFSALRLSGLARRCLVVAPSHLTVQWLVELFHKFNQLFTLMDSDRYAQ
SLKEAPEVSPWARFPLVVTSLEMLQRGEEHRRALAGEDAFWDLVIIDEAHHLKGERAFEA
AQVLAKNTWGLLLLTATPMQLDPAEYHGLLTLIDAATAPTVAGFEERLKRQEELSAAVRA
LMEGGKPSAAVQALARRFPEDAKLSSLKDRDALLQHLAETYSLSDRLVRNRRAVVGGFST
RRLHRHPVTLPAEELRVRDAALAVLAGASLRGAALGNVLRRLESSPAAFAGAVRANPVFK
GHADALRLPARDAKFSAFLGVLRGVWKAEPGAKVLVFTESRDTLDTLQSELGREGVEALG
YHGDLPLVERDRQVARFRDPEGPRVLLCTEVGGEGRNFQFAHHLVHYDLPWSPATVEQRI
GRLDRIGQTHPVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVEPRLAELA
LLPREARMAYAQELKARVEAARAQVKRAYDPLLDVRSFDQPAVERLVKRAQERMGIEADE
DDEAEAPSVEDGLWGIARDLDERLEETVTELARRVGIGVDTDEQVEAFQVAFQFGHALKV
DGLPGIDVMEDRTQLGTFWRDTAVEAEELEYFATGHPLVEALFGFLRDGPHGRSAFRFIE
RRGPLKGRGVELLFHVQLPEQEDTSPGARVPSRQLARFLTRTLVHVAVADAGGKPKAEPA
LLPALEKEGKSLKGDEVSLAFPGFADFVDAAVPVGQKAAEAELAKLAAQARKAIEAERDA
AVARQRLSLGHQGLSAEAVEAQLDAERAHYTRLLEALAGAKVVLDSACGFVLNR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgtcgaaggttcgaaggtccgctacctcccgcagcccgaatggggtgtgggg
catctgctgtcgctgcacgaggagggcgccaaggcgctcgtcgtcttccccgcccgggag
gacgccccggtgctggtgtccaccaagggcggcgccctggtgcagtacccgctgcctccg
ggcgagccggtcatcacctacaagggccgcctggcgctggtggtgcgcgaggagccgggc
gcgcgcggcctgcgccgctacgtgctgcgctacgcggagaacgacgaggaggacgagctg
ccggagtcctcgctgcgcgcgctgccgccccgctcggatttgctgtccaccctgcgcgag
ggccgcgtgggcgacgccagggccttcgcgctgcgcaagcaggccctgatgctggacgac
gagcgccgctgtgacgccctgggcgcgctgctggccagccgcatcatggtgaagccccac
caggtgggcgtggtgcagcgggtgctgtccgccagccgtccgcgcttcgtgctggcggac
gaggtgggcctggggaagaccatcgaggcgggcatggtgttcagcgcgctgcgcctgtcc
gggctggcgcgccgctgcctggtggtggcgcccagccacctcaccgtgcagtggctggtg
gagctgttccacaagttcaaccagctcttcacgctgatggactcggaccgctacgcgcag
tccctgaaggaggcgccggaggtgtcgccctgggcgcgcttcccgctggtggtgacgagc
ctggagatgctccagcgcggcgaggagcaccgccgcgcgctggccggcgaggacgccttc
tgggacctggtcatcatcgacgaggcgcaccacctcaagggcgagcgcgccttcgaggcc
gcgcaggtgctggcgaagaacacctggggcctgctgctgctcaccgccacgcccatgcag
ttggacccggcggagtaccacgggctgctcacgctcatcgacgcggccacggcgcccacc
gtggcgggcttcgaggagcggctcaagcgccaggaggagctgtccgccgcggtgcgcgcg
ctgatggagggcggcaagccgtccgccgcggtgcaggcgctggccaggcgcttccccgag
gacgcgaagctgtcctccctgaaggaccgggacgcgctgctccagcacctggcggagacc
tacagcctcagtgacaggctggtgcgcaaccgccgcgcggtggtgggcggcttctccacg
cgccggctgcaccgccacccggtgacgctgcccgccgaggagctgcgggtccgcgacgcc
gcgctggcggtgctcgccggggccagcctgcgcggcgcggcgctgggcaacgtgctgcgc
cgcctggagtccagccccgccgccttcgcgggcgcggtgcgcgccaaccccgtgttcaag
ggccacgcggacgcgctgcggcttccggcgcgagacgcgaagttcagcgccttcctgggc
gtgctgcgcggcgtctggaaggcggagcctggggcgaaggtgctcgtcttcacggagagc
cgcgacacgctggacacgctccagtccgagctgggccgcgagggcgtggaggcgctgggc
taccacggggatttgcccctggtggagcgcgaccggcaggtggcgcgcttccgcgacccg
gaggggcccagggtgctgctgtgcacggaggtgggcggcgagggccgcaacttccagttc
gcgcaccacctggtgcactatgacctgccctggagcccggccacggtggagcagcgcatt
ggccgcctggaccgcattggccagacgcacccggtggagattcacgtcttcgacccggcg
ggcacgctggcctccgacgtgctcatgctgctggcggacgcggtgggcgtcttcggcgag
acggtgggcggcctggacgcggtgttggaggaggtggagccgcggctggccgagctggcg
ctgctgccgcgcgaggcccgcatggcctacgcgcaggagctgaaggcccgcgtggaggcg
gcgcgcgcgcaggtgaagcgcgcgtatgacccgctgctggatgtgcgcagcttcgaccag
cccgccgtggagcgcctggtgaagcgcgcccaggagcgcatgggcatcgaggcggacgag
gacgacgaggcggaggcgcccagcgtggaggatggcctgtggggcatcgcgcgtgatttg
gacgagcggctggaggagacggtgacggagctggcgcgccgggtgggcatcggcgtggac
accgacgagcaggtggaggccttccaggtcgccttccagttcggccacgcgctgaaggtg
gacgggctgccgggcatcgacgtgatggaggaccgcacccagctcggcaccttctggcgc
gacaccgcggtggaggcggaggagctggagtacttcgccaccggccacccgctggtggaa
gccctcttcggcttcctgcgcgacggcccccatggccgcagcgccttccgcttcatcgag
cggcgcggaccgctgaaggggcgcggcgtggagctgctcttccacgtccagctcccggag
caggaggacacctcgcccggcgcccgcgtgcccagccgccagctcgcccgcttcctcacc
cgcacgctggtgcacgtcgccgtggcggacgcgggcgggaagcccaaggcggagcccgcg
ctgctgcccgcgctggagaaggagggcaagtcgctcaagggcgacgaggtgtcgctcgcc
ttcccgggcttcgcggacttcgtggacgcggcggtgcccgtgggccagaaggccgcggag
gcggagctggcgaagctggccgcccaggcgcgcaaggccattgaagcggagcgggacgcg
gccgtggcccgccagcgcctgtccctgggacaccagggcctctccgccgaggccgtggag
gcgcagttggacgccgagcgcgcccactacacccggctgctggaggccctggcgggcgcc
aaggtggtgctcgactccgcctgcggcttcgtgctcaaccgctga
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