Corallococcus macrosporus HW-1: LILAB_05480
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Entry
LILAB_05480 CDS
T01558
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfu03016
]
LILAB_05480
Enzymes [BR:
mfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LILAB_05480
Transfer RNA biogenesis [BR:
mfu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LILAB_05480
Prokaryotic type
LILAB_05480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AEI63017
UniProt:
F8CPZ4
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All DBs
Position
1310635..1311558
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AA seq
307 aa
AA seq
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MSLLRLTFLGTSAAQPTLHRNLSGLAVKAHADLLLFDCGEGSQRQMVRYGTGFTVDAVFF
THFHADHYLGIIGFLRTLGMTGRSEPIHLYGPPSARRLLHQAVHLGVESLSFPVEIHELK
DGDVVPRKGYAVHAVGVDHRINALGYALVEDERPGRFNLETARALGVPEGPSFGKLQRGE
PVTLADGRTVKPEDVLGAPRPGRKLVISGDTRPCPALVKASRDADLLVHESTFSDDEQER
AVETRHSTAREAARVAKEAGARRLVLTHLSSRHDTDPSKLLTQAREEYQGPVEVAFDGFT
VELPLRD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcctcaggctcacgttcctcggtacctccgccgcgcagcccacgctgcaccgg
aacctgtccggactggcggtgaaggcgcacgcggacctgctgctcttcgactgcggcgag
ggcagccagcggcagatggtgcgctacggcaccggcttcaccgtggacgcggtgttcttc
acgcacttccacgcggaccactacctgggcatcatcggcttcctgcgcacgctgggcatg
acgggccgctccgagcccatccacctgtacggcccgccctccgccaggcgcctgctccac
caggccgtccacctgggcgtggagtccttgtccttcccggtggagattcacgaactgaag
gacggggacgtggtgccgcgcaagggctacgcggtgcacgcggtgggcgtggaccaccgc
atcaacgcgctgggctacgcgctggtggaggacgagcggcccgggcgcttcaacctggag
acggcgcgcgcgctgggcgtgccggagggccccagcttcggcaagctccagcggggcgag
ccggtgacgctggcggacgggcggacggtgaagccggaggacgtgctgggcgcgccgcgc
cccgggcgcaagctggtcatctccggggacacgcggccctgccccgccctggtgaaggcg
tcgagggacgcggacctgctggtccacgagtccaccttctccgacgatgagcaggagcgg
gcggtggagacccggcactccacggcgcgggaggcggcgcgcgtggcgaaggaggcgggc
gcgcggcggctggtgctcacccacctctccagccgtcacgacaccgacccctcgaagctg
ctcacgcaggcgcgcgaggagtaccaggggccggtggaggtggcgttcgacggcttcacc
gtcgagctgcccctgcgtgactga
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