Corallococcus macrosporus HW-1: LILAB_17045
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Entry
LILAB_17045 CDS
T01558
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03030
DNA replication
mfu03430
Mismatch repair
mfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LILAB_17045
03430 Mismatch repair
LILAB_17045
03440 Homologous recombination
LILAB_17045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfu03032
]
LILAB_17045
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_17045
Enzymes [BR:
mfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LILAB_17045
DNA replication proteins [BR:
mfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LILAB_17045
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LILAB_17045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF4795
DUF655
Motif
Other DBs
NCBI-ProteinID:
AEI65312
UniProt:
F8CMN3
LinkDB
All DBs
Position
4017528..4021082
Genome browser
AA seq
1184 aa
AA seq
DB search
MSFTHLHLHTLYSLLDGAIRMKDLIKTVKEKGMSSVAVTDHGNMFGAIDFYKKAKDAGIK
PILGMEAYVAGPKGREDRSEKVSHHLILVAKNAEGYANLRYLSSTAYMHGFYYHPRIDKK
VLAEHSKGLFALTACLGGEITSACFRGDMDHARRAAQEYKDIFEPGHFFLEVQSNGMPEQ
EKANENLFQLSRDLDIPLCATADAHYIKREDARAHELLMCIASGKTLADGKRMKHSTDKL
YVTSPTEMLEFFKDTPEAVHNTQRIAEQCNLELKLGKPMLPTFKVPDSHTPDSFMAELAY
EGLRERFKELAATVTYPIDREQYQARLALEIGVIQKMGFSGYFLIVQDFINWAKKMNIPV
GPGRGSGAGSLVAYALRITDVDPIPYNLLFERFLNPERVSMPDFDIDFCQDRRDEVIQYV
GRKYGEMNVGQIITFGSLKAKSVLRDVCRVFALPFSEGDRIAKLVPEVLNITLKEAIEME
PRLKEMMETPSNIGEVEGKPVTTKDVLEIALALEGLHRQPGMHAAGVVIADKPLWEFVPV
YQPPGEKTLITQFAKDEVEAAGLVKFDFLGLKTLTVIQHALDLVKRNHDKDIPRHEIPLN
DEKTWELMAKGDTAGVFQMESSGFTEMVVKLKPNCFEDVIAAGALYRPGPLDSGMVDVFI
NRKHGREKVSYPHPALEPVLKDTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKKA
EVMQAERAGFLEGCAKNNVDLKVAGEIFDLMEKFAEYGFNKSHSAAYGLVTIHTAWLKAH
YPCEFMAALLSSEKDNTDKVVKHIGEARESGLEVLPPDVNQSDMEFGAVDGKIRFGLGAI
KGVGEGAIESILEARKDGHFKSLFDFCERVDSRKVNRKVMEALVKAGAFDFEKRSRRQIF
DTIEKAMNRGSASQKDKAAGQSSLFGMLAGPSSGGGGGLKDDYVEVEDWSEKERLSLEKE
AIGFYVSGHPLHQYDKELKRYARPITAVQRARKDDKLTVAGIVTVLRERPTKTGKRMAWV
TIEDLSGSIELVCFPGKDGTRNVMGKDGKWAKQGPKPGFEHWEHLLKSDDPILVSGTVQI
SQRDEDAPTPELIVDDIQSLKAVREKRTKRLELRVPADLLTEDRVAKLHELAKKYAGATP
VAVSVLFKGEGEALIGNTSIKVQVSDDLLLAVDRLFGMRVVEFG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttacccacctccacctgcacaccctctactcgctcctcgatggggcgatccgg
atgaaggacctcatcaagacggtgaaggagaaggggatgagcagcgtcgccgtgacggac
cacggcaacatgttcggcgccatcgacttctacaagaaggcgaaggacgcgggcatcaag
ccgattctcggcatggaggcctacgtcgccgggccgaaggggcgcgaggaccgctccgag
aaggtctcccaccacctcatcctggtggcgaagaacgcggagggctacgccaacctgcgc
tacctctcctccaccgcgtacatgcacgggttctactaccacccgcgcatcgacaagaag
gtgctcgcagagcacagcaagggcctgttcgcgctcaccgcctgcctgggtggtgaaatc
accagcgcctgcttccgcggcgacatggaccacgcccgccgcgcggcgcaggagtacaag
gacatcttcgagcccgggcacttcttcctggaggtgcagtccaacgggatgccggagcag
gagaaggcgaacgagaacctcttccagctctcgcgcgacctggacatcccgctgtgcgcc
accgcggacgcgcactacatcaagcgcgaggacgcgcgggcgcacgagctgctcatgtgc
atcgccagcggcaagacgctggcggacggcaagcgcatgaagcactccacggacaagctc
tacgtcaccagccccacggagatgctggagttcttcaaggacacgcccgaggcggtccac
aacacccagcgcatcgcggagcagtgcaacctggagctgaagctgggcaagcccatgctg
cccaccttcaaggtgcccgacagccacacgccggacagcttcatggcggaactggcctat
gaaggcctgcgcgagcgcttcaaggaactggccgccaccgtcacgtaccccatcgaccgc
gagcagtaccaggcgcggctggcgctggagattggcgtcatccagaagatggggttcagc
ggctacttcctcatcgtccaggacttcatcaactgggcgaagaagatgaacatcccggtg
ggcccgggccgtggctccggcgccggcagcctggtggcctacgcgctgcgcatcaccgac
gtggaccccatcccgtacaacctcctcttcgagcgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgatatcgacttctgccaggaccgccgggacgaggtcatccagtacgtc
ggccgcaagtacggcgagatgaacgtggggcagatcatcaccttcggctcgctgaaggcg
aagagcgtgctgcgcgacgtgtgccgcgtgttcgcgctgcccttcagtgaaggtgaccgc
atcgcgaagctggtgccggaggtgctcaacatcaccttgaaggaggccatcgagatggag
cctcgcctcaaggagatgatggagacgccctccaacatcggcgaggtggagggcaagccc
gtcaccaccaaggacgtgctggaaatcgcgctcgcgctggagggcctgcaccgccagccc
ggcatgcacgccgccggcgtggtgatcgccgacaagccgctgtgggagttcgtgcccgtc
taccagccgccgggtgagaagacgctcatcacccagttcgccaaggacgaggtggaggcg
gccggcctggtgaagttcgacttcctcgggctgaagacgctcacggtgattcagcacgcg
ctggacctggtgaagcgcaaccacgacaaggacatcccgcggcacgagattccgctcaac
gacgagaagacctgggagttgatggccaagggcgacacggccggcgtcttccagatggag
tccagcggcttcacggaaatggtcgtgaagctcaagccgaactgcttcgaagacgtcatc
gccgccggcgcgctctaccgcccgggtccgctggactccggcatggtggacgtcttcatc
aaccgcaagcacggccgggagaaggtgtcgtacccgcaccccgcgctggagccggtgctc
aaggacacctacggcgtcatcgtgtaccaggagcaggtgatgcagatttcgcaggtcctg
ggtggctacaccctgggccgcgcggacctgcttcgccgcgccatgggcaagaagaaggcc
gaggtcatgcaggccgagcgggccggcttcctcgagggctgcgcgaagaacaacgtcgac
ctcaaggtcgccggtgaaatcttcgacctgatggagaagttcgccgagtacggcttcaac
aagagccactcggcggcctacggcctggtcaccatccacacggcctggctgaaggcgcac
tacccctgcgagttcatggcggcccttctctccagcgagaaggacaacacggacaaggtg
gtgaagcacatcggcgaggcgcgcgagtcgggcctcgaggtgctgccgccggacgtgaac
cagtccgacatggagttcggcgcggtggacgggaagattcgcttcggcctgggcgccatc
aagggcgtgggcgagggcgccatcgagtccatcctggaggcgcgcaaggacggccacttc
aagagcctgttcgacttctgcgagcgcgtggacagccgcaaggtgaaccggaaggtgatg
gaagcgctggtgaaggcgggcgccttcgacttcgagaagcgctcgcgccggcagatcttc
gacaccatcgagaaggcgatgaaccgcggctcggccagccagaaggacaaggcggccggg
cagagctcgctgttcgggatgctggccggtccgtcctcgggtggcggcggcgggctgaag
gacgactacgtcgaggtggaggactggtcggagaaggagcggctgtcgctggagaaggag
gccatcggcttctacgtgtccggccacccgctgcaccagtacgacaaggagctgaagcgc
tacgcgcggccgattacggcggtgcagcgcgcgcgcaaggacgacaagctcacggtggcg
ggcatcgtcacggtgctgcgcgagcggcccacgaagacgggcaagcgcatggcgtgggtg
acgattgaagacttgtccggctccatcgagctggtgtgcttcccgggcaaggacggcacg
cgcaacgtgatgggcaaggacggcaagtgggcgaagcagggccccaagccgggcttcgag
cactgggagcacctgctcaagtcggacgaccccatcctggtgtccggcacggtgcagatc
agccagcgtgacgaggacgcgcccacgccggagctcatcgtcgacgacatccagagcctc
aaggcggtgcgcgagaagcgcaccaagcgcctggagctgcgcgtgccggcggacctcctg
acggaggaccgggtggcgaagctgcacgagctggcgaagaagtacgccggcgccacgccc
gtggcggtgagcgtgctcttcaagggcgagggcgaggcgctcatcggcaacacgtccatc
aaggtgcaggtgagtgacgacctgctcctggcggtggaccgcctgttcggcatgcgggtg
gtggagttcggctga
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