Corallococcus macrosporus HW-1: LILAB_20120
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Entry
LILAB_20120 CDS
T01558
Name
(GenBank) type II DNA topoisomerase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfu03032
]
LILAB_20120
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_20120
Enzymes [BR:
mfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LILAB_20120
DNA replication proteins [BR:
mfu03032
]
Prokaryotic type
DNA Topoisomerases
LILAB_20120
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LILAB_20120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIP1_clath_bdg
Motif
Other DBs
NCBI-ProteinID:
AEI65926
UniProt:
F8CBW0
LinkDB
All DBs
Position
complement(4748055..4750433)
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AA seq
792 aa
AA seq
DB search
MLAEAESKSRKKQGAGGGGGGGGGGAAGGNGDGSVPASLADEARRRYINYALSVITSRAL
PDVRDGLKPVQRRILFGMYHDHRLTHEAKYQKSAKVVGSVMGQYHPHGDASIYEALVRMA
QDFSLRYPLVDGHGNFGSLDGDGAAAMRYTECRLAMLSSELLTELGKKTVAFRPTYDGTL
QEPVVIPARVPQLLMNGTTGIAVGMATNIPPHHLGELVDALVALIENPQLVTKDLLRWVK
GPDFPTGGQILNDKKELRDIYESGQGSIRIRGEYKLEDLKRGGQQLVITSIPYTVNKSTL
VAKFGDLVRERKLPLITDVRDESTKDVRIVLELKKDANPELVMAYLYKQTPLQTNFGVNL
TCLVPIKDNPELSTPQRLNLKDILQYFLDFRFEVVTKRFEHELGELLRRVHILEGFEKVY
DALDEMIKIIRASEGKQDAAKKLIARFKLDEVQVDAILEMKLYKLARLEILVVEKELKEK
RAEIKRIQGILKDKKKVWGTVRDELGELKARYNDKRRTRIGGAGAEEMEFSAEAFIADED
AHVVITRDGWVKRVREVKDPSTTRLREGDAVMAVLAGSLKANLVLFSNFGTAYVTRFNDV
PASTGYGEPVQKFFKFDDGERVVSAVSLDARLPRPQKLVGVTKQGLGMRFLLEPHLEVST
RAGRRYAKTGEGDEIIGVQPVTDRDLLAVLTEKTSALVCKVAEVNELAGPGKGVTVIKVD
GGDRVVDFLAVSPAQKDARLEFETQKGRKLHLSPAKYGVTGRGGKGHEMSKRDAVKEVAR
PVTFIPLPEKKD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagaagccgaatcgaaatcgcgaaagaagcagggagccgggggaggcggcggc
ggcggtggtggcggcgccgcgggtggcaacggtgacggctccgtgccggcctcgctcgcg
gacgaggcgcgccggcggtacatcaactacgccctgtcggtcatcacctcgcgcgccctg
ccggacgtgcgcgacggcctcaagccggtgcagcgccgcatcctgttcggcatgtaccac
gaccaccggctgacgcatgaggccaagtaccagaagtccgccaaggtggtcggcagtgtg
atgggtcagtaccacccgcacggtgacgcctccatctacgaggcgctggtgcgcatggcg
caggacttctcgctgcgctacccgctggtggacggccacggcaacttcggctcgctcgac
ggcgacggcgcggcggccatgcgctacaccgagtgccgtctggccatgctgtccagcgag
ctgctgacggagctgggcaagaagacggtggccttccggccgacctacgacggcacgctc
caggagccggtggtcatccccgcgcgggtgccgcagctcctgatgaacggcaccacgggc
atcgccgtgggcatggccaccaacatcccgccgcaccacctgggtgagctggtggacgcg
ctggtggcgctcatcgagaacccgcagctcgtgacgaaggacctgctccggtgggtgaag
gggccggacttccccacgggcgggcagatcctcaacgacaagaaggagctgcgggacatc
tacgagtcgggccaggggagcatccgcatccgcggtgagtacaagctggaggacctcaag
cggggcggccagcagctcgtcatcacctccatcccctacacggtgaacaagtccacgctg
gtggccaagttcggcgacctggtgcgcgagcggaagctgccgctcatcaccgacgtgcgc
gacgagtccaccaaggacgtgcgcatcgtcctggagctgaagaaggacgccaaccccgag
ctggtgatggcgtacctgtacaagcagacgccgctgcagacgaacttcggcgtcaacctc
acctgcctggtccccatcaaggacaaccccgagctgagcacgccgcagcggctcaacctc
aaggacatcctccagtacttcctcgacttccgcttcgaggtggtgacgaagcgcttcgag
cacgagctgggcgagctgctccggcgcgtccacatcctggagggcttcgagaaggtctac
gacgcgctcgacgagatgatcaagatcatccgcgcgtcggagggcaagcaggacgccgcg
aagaagctcatcgcccgcttcaagctggatgaggtccaggtggacgccatcctggagatg
aagctctacaagctggcgcgcctggagatcctcgtcgtggagaaggagctcaaggagaag
cgcgccgaaatcaagcgcatccagggcatcctcaaggacaagaagaaggtgtggggcacc
gtccgcgacgagctgggcgagctgaaggcccgctacaacgacaagcgccgcacgcgcatt
ggcggcgcgggcgccgaggagatggagttcagcgccgaggcgttcatcgcggacgaggac
gcgcacgtggtcatcacccgcgacggctgggtcaagcgcgtgcgcgaggtgaaggacccg
tccaccacccgcctgcgtgaaggcgacgcggtgatggcggtgctggccggcagcctcaag
gccaacctggtgctcttcagcaacttcggcaccgcgtatgtcacccgcttcaacgacgtg
ccggcctccacgggctacggcgagccggtgcagaagttcttcaagttcgacgacggcgag
cgcgtggtgtccgccgtgtcgctggacgcgcggctgccgcgcccgcagaagctggtgggc
gtgacgaagcagggcctgggcatgcgcttcctcctggagccgcacctggaggtctccacg
cgcgcgggccgccgctacgcgaagacgggcgaaggcgatgaaatcatcggcgtgcagccg
gtgacggaccgcgacctgctggcggtgctgacggagaagaccagcgccctggtgtgcaag
gtggcggaggtcaacgagctggccggccccggcaagggcgtcaccgtcatcaaggtggac
ggcggggaccgcgtggtggacttcctcgccgtgtcgcccgcccagaaggacgcgaggctg
gagttcgagacgcagaagggccgcaagctgcacctgtccccggcgaagtacggggtgacg
ggccgcggcggcaagggccacgagatgtcgaagcgcgacgccgtgaaggaggtggcgcgc
cccgtcaccttcatcccgttgcccgagaagaaggactag
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