Corallococcus macrosporus HW-1: LILAB_20840
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Entry
LILAB_20840 CDS
T01558
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LILAB_20840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_20840
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LILAB_20840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LILAB_20840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
UB2H
DUF87
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AEI66068
UniProt:
F8CEJ7
LinkDB
All DBs
Position
4926607..4928721
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AA seq
704 aa
AA seq
DB search
MPDFQLVSDHKPEGDQPRAIDELTQGVQRGDRYQTLLGVTGSGKTFTMANIIANVQRPTL
VMAHNKTLAAQLYGEFKALFPHNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSINDNIER
MRHSATHSLRTRDDVIIVASVSCIYGLGAARSYVDLAVRAAVGEEMGRDTFMRKLVEAQY
KRNDLDFHRGTFRARGDTVEVFPAYEEERAVRVSFFGDEVERVTEFDPLRGVTVGALEKI
VIFPASHYVAEEDVRRRAIQTIRDELTEQLQTFKREGKLLEAQRLEQRAMFDLEMIEQVG
YCSGIENYSRHFSGRAAGEPPPCLIDYFPRNLLVMLDESHQTVPQIGAMYRGDRARKETL
VGFGFRLPSALDNRPLKFGEFEELVPQAIFVSATPSEYELLKSQGVVVEQIIRPTGLTDP
EVEIRPVGNQVDDLLEEVRQRVARSERVLVTTLTKRMAEDLTEYFADVGVRVRYLHSDID
AIERMAIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSLIQTIGR
AARNVNGRVIMYADNVTDSMKKALEETTRRREIQQAYNQEHGITPRSVKSNITDLSEHVA
YEAGDVGALPMAAEGEDDVLQPKEIKRLIEDFTKEMLAAADEMQFEKAAEYRDRVQLLKD
MDLGLKPASRSLLRAPAKAADAEAPKKGRGRGGGGRSTRARSRK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccggacttccaactcgtcagcgaccacaagcccgagggcgaccagccgagggccatt
gacgaactcacgcagggcgtccagcggggcgaccgctaccagaccctcctgggtgtcacc
gggtcgggaaagaccttcacgatggcgaacatcatcgccaacgtgcagcggcccacgctg
gtgatggcccacaacaagacgctggccgcccagctctacggcgagttcaaggcgctcttc
ccgcacaacgccgtcgagtacttcgtctcgtactacgactactaccagcccgaggcctac
gtcccgtcgacggacaccttcatcgagaaggactcgtccatcaacgacaacatcgagcgg
atgcgccactcggccacccactcgctgcggacgcgggatgacgtcatcatcgtcgccagc
gtgtcctgcatctacggcctgggcgcggcccgcagctacgtggacctggcggtgcgcgcg
gcggtgggcgaggagatgggccgcgacaccttcatgcgcaagctggtggaggcccagtac
aagcgcaacgatctggacttccaccgcggcaccttccgcgcgcgcggcgacaccgtggag
gtgttccccgcctacgaggaggagcgcgccgtgcgcgtcagcttcttcggcgacgaggtg
gagcgcgtcaccgagttcgacccgctgcgtggcgtgacggtgggcgcgctggagaagatc
gtcatcttccccgccagccactacgtggccgaggaggacgtgcgccgccgcgccatccag
accatccgcgacgagctgaccgagcagctccagaccttcaagcgcgagggcaagctgctg
gaggcgcagcggctggagcagcgcgccatgttcgacctggagatgatcgagcaggtcggc
tactgcagcggcatcgagaactactcgcggcacttctccggccgcgcggcgggggagccg
cccccgtgtctcatcgactacttcccgcgcaacctgctggtgatgctcgacgagagccac
cagacggtgccgcagattggcgccatgtaccgcggcgaccgcgcgcgcaaggagacgctg
gtgggcttcggcttccgcctgcccagcgccctggacaaccgcccgctcaagttcggcgag
ttcgaggagctggtgccacaggccatcttcgtctccgcgacgccctccgagtacgagctg
ctgaagtcccagggcgtggtggtggagcagatcatccgccccaccggcctgacggacccg
gaggtggagatccgccccgtgggcaaccaggtggacgacctgctggaggaggtgcgccag
cgcgtggcccggagcgagcgcgtcctggtgacgacgctcaccaagcgcatggcggaggac
ctcacggagtacttcgccgacgtgggcgtgcgcgtgcgctacctgcactcggacattgac
gcgattgagcgcatggccatcatccgtgacctgcgcaagggcgagttcgacgtcctggtg
ggcatcaacctgctgcgcgagggcctggacatccccgaggtgtccctggtggccatcctg
gacgcggacaaggagggcttcctgcgcagccacgtctccctcatccagacgattggccgc
gccgcccgcaacgtgaatggccgcgtcatcatgtacgcggacaacgtcaccgactccatg
aagaaggccctggaggagacgacgcgccgccgtgaaatccagcaggcgtacaaccaggag
cacggcatcaccccgcgctcggtgaagagcaacatcaccgacctgtccgagcacgtggcc
tacgaggccggggacgtgggcgcgcttcccatggcggccgaaggcgaggacgacgtcctc
cagccgaaggaaatcaagcggctcatcgaggacttcaccaaggagatgctcgccgccgcg
gacgagatgcagttcgagaaggccgccgagtaccgggaccgggttcagctcctgaaggac
atggacctggggctcaagccggcgtcgcgctcgctgctgcgggccccggcgaaggccgcg
gacgcggaggccccgaagaagggccgggggcgcgggggcggaggccgctccacgcgggcc
cggagccgcaagtag
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