Corallococcus macrosporus HW-1: LILAB_23270
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Entry
LILAB_23270 CDS
T01558
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03030
DNA replication
mfu03410
Base excision repair
mfu03420
Nucleotide excision repair
mfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LILAB_23270
03410 Base excision repair
LILAB_23270
03420 Nucleotide excision repair
LILAB_23270
03440 Homologous recombination
LILAB_23270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfu03032
]
LILAB_23270
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_23270
Enzymes [BR:
mfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LILAB_23270
DNA replication proteins [BR:
mfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LILAB_23270
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LILAB_23270
NER (nucleotide excision repair)
GGR (global genome repair) factors
LILAB_23270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_A_exo1
CPV_RdRP_pol_dom
HHH
Motif
Other DBs
NCBI-ProteinID:
AEI66549
UniProt:
F8CMS7
LinkDB
All DBs
Position
5541470..5544196
Genome browser
AA seq
908 aa
AA seq
DB search
MVDTSPPRSAPTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELKPT
HVALAFDKESRTERQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADD
VIGTLAVKAKAEGFCVQVVTGDKDFVQIVDSDVRLYDPMKDVHTQPADVKARLGIEPGQM
RDYLALIGDAVDNVPKVPGIGPKTATELIQQFGDVETLLSRLDEVKKPKIRENIASHRES
LLRAKQLVTFKTDLALDVRMADLARRPLDAQRSRELFTELEFFALLKELPQQDGAAGTSE
PPKEQPAPLTVTPTLVGSDAELMRLAGAAREAGAVTLIPAYEGAPFAAKLVGLGVALPDG
QTAYVPLRHAQLGVTQVKPEAFTAAFREVLEDAAVKKGGHDLKALSLVLANDGLTLHGAH
DDVELLSYLLNPSRREHALVDLARERLYSELPPLPNAAEGKRGKKDRALADHTVEEVATG
FAIRAEAARRLAPELWKELEAAKLAALARDMELPLLPLLARMERRGVLLDTAELSRTSVK
VDAAVEAQVKEVYRHAGREFNIGSNPQLVEVLFTELKLPVIKRGKTGPSADQEVLEKLSE
EHPLPGAIIEYRSLSKLKSTYLDTLPTLVAADGRIHTTYHQAATATGRLSSTDPNLQNIP
VRTDLGREIRRAFVAAEGHQLVSADYSQVELRLLAHIANDAVLIEAFLHDEDIHTRTAAE
VFGVAKEQVDREQRRVAKMVNFGIAYGLSPHGLAARLGIAQDVARDIIERYFTRYAGIKR
YLEETVSVARKTGYVETLYGRRRYMADLNSKNRGVAQAAERAAINMPIQGTAADLIKKAM
LAVDAALEAQKLSARMLLQVHDELLFEAPDAEVEAVKALAVKAMSSVADLKVPLKVDVGA
GRSWADAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaccagccctccgcgctcagcgcccaccctggtcctcatcgacgcgtccggc
ttcatcttccgcgcctaccacgccatccctccgctcacgacgagcaagggggtgcagacc
aacgccgtgctgggcttcacgcgcatggtgctcaaggccctgcgcgagctgaagcccacg
cacgtggcgctcgccttcgacaaggagagccgcaccgagcgccagaagatcgaccccacg
tacaaggcgaaccgcgagggccccccggaggacctcgtcccccagttcgccctcatccgc
cgcgtggtggaagccatcaacgtgcccgtgctggaggtggccggctgggaggccgacgac
gtcatcggcaccctggccgtgaaggcgaaggcggagggcttctgcgtccaggtcgtcacc
ggcgacaaggacttcgtccagattgtcgacagcgacgtgcgcctgtacgacccgatgaag
gacgtgcacacgcagcccgcggacgtgaaggcgcggctgggcatcgagccggggcagatg
cgggactacctggccctcatcggcgacgcggtggacaacgtccccaaggtgccgggcatc
ggcccgaagacggccaccgagctcatccagcagttcggtgacgtggagacgctgctgtcg
cgcctggacgaggtgaagaagccgaagatccgggagaacatcgcctcgcaccgcgagagc
ctcctgcgcgccaagcagctcgtcaccttcaagacggacctggcgctggacgtgcgcatg
gcggacctggcccgccggccgctggacgcgcagcgctcgcgtgagctgttcaccgagctg
gagttcttcgccctcctcaaggagctgccgcagcaggacggcgccgcgggcacctccgag
ccgccgaaggagcagcccgcgccgctgacggtgacgccgacgctggtgggctcggacgcg
gagctcatgcggctcgcgggcgccgcgcgcgaggcgggcgccgtcacgctgattcccgcg
tacgagggcgcgcccttcgccgcgaagctggtgggcctgggcgtggcgctgccggacggc
cagacggcgtatgtgccgctgcggcacgcgcagctcggcgtcacgcaggtgaagccggag
gccttcaccgcggccttccgcgaggtgctggaggacgcggcggtgaagaagggcggtcac
gacctcaaggcgctcagcctggtcctggccaacgacggcctcaccctgcacggcgcgcac
gacgacgtggagctgctcagctacctgctcaacccgtcccgccgggagcacgcgctggtg
gacctggcgcgcgagcggctctactcggagctgccgccgctgccgaacgccgcggagggc
aagcgcggcaagaaggaccgggccctggcggaccacacggtggaggaggtggccaccggg
ttcgccatccgcgccgaggccgcgcgccggctcgcgcccgagctgtggaaggagctggag
gccgcgaagctggcggcgctggcccgggacatggagctgccgctgctgccgctcctggcg
cggatggagcggcggggcgtgctgctggacaccgccgagctgtctcgcacctcggtgaag
gtggacgcggccgtcgaggcgcaggtgaaggaggtctaccggcacgcgggccgcgagttc
aacatcggctccaacccgcagctcgtggaggtgctcttcacggagctgaagctgcccgtc
atcaagcggggcaagacgggcccctccgcggaccaggaggtgctggagaagctctccgag
gagcacccgctgccgggcgccatcatcgaataccgcagcctgtccaagctgaagagcacc
tacctggacacgctgcccacgctggtggccgccgacgggcgcatccacaccacctaccac
caggcggccaccgccaccgggcgcctgtcctccaccgacccgaacctccagaacatcccc
gtgcgcacggacctgggccgggagatccgccgcgccttcgtggccgcggaggggcaccag
ttggtgagcgcggactacagccaggtggagctgcggctgctggcgcacatcgcgaacgac
gcggtgctcatcgaggccttcctccatgacgaggacatccacacccgcaccgcggcggag
gtcttcggcgtggccaaggagcaggtggaccgcgagcagcgccgcgtggcgaagatggtg
aacttcggcatcgcctacggcctgtcaccgcatggcctggcggcgcggctgggcatcgcc
caggacgtggcccgcgacatcatcgagcgctacttcacgcgctacgcgggcatcaagcgg
tacctggaggagaccgtctccgtggcgcgcaagacgggctacgtggagacgctgtacggc
cgccgccgctacatggcggacctgaactccaagaatcgcggcgtggcccaggccgccgag
cgcgccgccatcaacatgcccatccagggcacggccgcggacctcatcaagaaggccatg
ctggcggtggacgcggcgctcgaggcgcagaagctgagcgcgcggatgctgctgcaggtc
cacgacgagctcctcttcgaggcgcccgacgcggaggtggaggcggtgaaggcgctggcg
gtcaaggccatgtcctcggtggccgacctgaaggtgccgctcaaggtggacgtgggcgcg
gggcggagctgggcggacgcgcactga
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